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Harri Kokko

Harri Kokko

Researcher

Department of Environmental and Biological Sciences, Faculty of Science, Forestry and Technology

harri.kokko@uef.fi | +358 40 355 3375

Information Publications

Research groups

Global Development 01.01.2020 -
Plant biology 23.11.2022 - 31.01.2025
The research group of Aquatic Ecology and Behavio… 01.01.2010 -

Projects

KAMUT - Growth for strawberries from new technologies 01.09.2023 - 31.08.2026
KAMUT - Growth for strawberries from new technologies - investment 01.01.2024 - 31.12.2025

Keywords

apple arctic bramble berries crayfish stawberry

Publications

140/140 items

Non-invasive assessment and visualization of Phytophthora cactorum infection in strawberry crowns using quantitative magnetic resonance imaging
Tuomainen, Teemu Valtteri; Toljamo, Anna; Kokko, Harri; Nissi, Mikko Johannes. 2024. Scientific reports. 14: . 2129
Dynamics and distribution of nitrogen and carbon from fish feed in aquaponic system estimated using stable isotopes and biomass measurements
Nykänen, Hannu; Semberg, Sanni; Jussila; Japo; Kokko, Harri. 2023. Itä-Suomen yliopisto
Nitrogen and carbon dynamics and circulation in the aquaponic system followed using 13C and 15N isotopes
Semberg, S.; Nykänen, H.; Jussila, J; Nousiainen, A.; Roponen, T.; Kokko, H.. 2023. Itä-Suomen yliopisto
Coir, wood shavings and peat as growth substrates for arctic bramble
Tommila, Tero; Kämäräinen, Antti; Kokko, Harri; Palonen, Pauliina. 2022. Mires and peat. 28:
Raputilanne selville pelkästä vesinäytteestä?
Ruokonen, Timo; Mäkinen, Mikko; Ventelä, Emmi; Kokko, Harri; Pesonen, Aake; Jussila, Japo. 2022. Suomen Kalastuslehti. 3: 18-21
Sphagnum moss is a promising growth substrate in arctic bramble container cultivation
Tommila, Tero; Kämäräinen, Antti; Kokko, Harri; Palonen, Pauliina. 2022. Acta agriculturae scandinavica section B : soil and plant science. 72: 997-1008
Controlled Infection Experiment With Aphanomyces astaci Provides Additional Evidence for Latent Infections and Resistance in Freshwater Crayfish
Francesconi, Caterina; Makkonen, Jenny; Schrimpf, Anne; Jussila, Japo; Kokko, Harri; Theissinger, Kathrin. 2021. Frontiers in ecology and evolution. 9: 647037
Eroded Swimmeret Syndrome: Update of the Current Knowledge
Jussila, Japo; Tiitinen, Vesa; Makkonen, Jenny; Kokko, Harri; Bohman, Patrik; Edsman, Lennart. 2021. Freshwater crayfish. 26: 63-68
Is Aphanomyces astaci Loosing its Stamina: A Latent Crayfish Plague Disease Agent From Lake Venesjärvi, Finland
Jussila, J; Francesconi, C; Theissinger, K; Kokko, H; Makkonen, J. 2021. Freshwater crayfish. 26: 139-144
Jokirapujen ja täplärapujen esiintymisen selvittäminen eDNA-menetelmällä
Mäkinen, Mikko; Jussila, Japo; Sjövik, Rosanna; Ventelä, Emmi; Kokko, Harri; Pesonen, Aake; Ruokonen, Timo J. 2021. Jyväskylän yliopiston bio- ja ympäristötieteiden laitoksen tiedonantoja. .
Terpenoid and lipid profiles vary in different Phytophthora cactorum - strawberry interactions
Toljamo, Anna; Koistinen, Ville; Hanhineva, Kati; Kärenlampi, Sirpa; Kokko, Harri. 2021. Phytochemistry. 189: 112820
Development and evaluation of a recombinase polymerase amplification assay for rapid detection strawberry red stele pathogen
Munawar, Mustafa Ahmad; Toljamo, Anna; Martin, Frank; Oksanen, Elina; Kokko, Harri. 2020. Phytopathology research. : 26
Narrow-clawed crayfish in Finland: Aphanomyces astaci resistance and genetic relationship to other selected European and Asian populations
Jussila, Japo; Maguire, Ivana; Kokko, Harri; Tiitinen, Vesa; Makkonen, Jenny. 2020. Knowledge and management of aquatic ecosystems. 421: 1-9
RPA-PCR couple: an approach to expedite plant diagnostics and overcome PCR inhibitors
Munawar, MA; Martin, F; Toljamo, A; Kokko, H; Oksanen, E. 2020. Biotechniques. 69: 271-281
Expression of GAF sensor, CAZymes, elicitins, and RXLRs differs markedly between two Phytophthora cactorum isolates
Toljamo, Anna; Blande, Daniel; Munawar, Mustafa Ahmad; Kärenlampi, Sirpa; Kokko, Harri. 2019. Phytopathology. 109: 726-735
Mapping 15 years of crayfish plague in the Iberian Peninsula: The impact of two invasive species on the endangered native crayfish
Martín-Torrijos, L; Kokko, H; Makkonen, J; Jussila, J; Diéguez-Uribeondo, J. 2019. PLoS ONE. 14: e0219223
Recombinase Polymerase Amplification Assay for fast, sensitive and on-site detection of Phytophthora cactorum without DNA extraction
Munawar, M; Toljamo, A; Martin, F; Kokko, H. 2019. European journal of horticultural science. 84: 14-19
The signal crayfish (Pacifastacus leniusculus) in Lake Tahoe (USA) hosts multiple Aphanomyces species
Makkonen, J; Kokko, H; Gökmen, G; Ward, J; Umek, J; Kortet, R; Petrusek, A; Jussila, J. 2019. Journal of invertebrate pathology. 166: 107218
Crayfish plague in Japan: A real threat to the endemic Cambaroides japonicus
Martín-Torrijos, L; Kawai, T; Makkonen, J; Jussila, J; Kokko, H; Diéguez-Uribeondo, J. 2018. PLoS ONE. 13: e0195353
Genome-wide divergence patterns support fine-scaled genetic structuring associated with migration tendency in brown trout
Lemopoulos, Alexandre; Uusi-Heikkilä, Silva; Vasemagi, Anti; Huusko, Ari; Kokko, Harri; Vainikka, Anssi. 2018. Canadian journal of fisheries and aquatic sciences. 75: 1680-1692
Introduced alien signal crayfish (Pacifastacus leniusculus) in Finland - uncontrollable expansion despite numerous crayfisheries strategies
Ruokonen, Timo J; Sjövik, Rosanna; Erkamo, Esa; Tulonen, Jouni; Ercoli, Fabio; Kokko, Harri; Jussila, Japo. 2018. Knowledge and management of aquatic ecosystems. : 27
MtDNA allows the sensitive detection and haplotyping of the crayfish plague disease agent Aphanomyces astaci showing clues about its origin and migration
Makkonen, Jenny; Jussila, Japo; Panteleit, Jörn; Keller, Nina Sophie; Schrimpf, Anne; Theissinger, Kathrin; Kortet, Raine; Martín-Torrijos, Laura; Sandoval-Sierra, Jose Vladimir; Javier, Diéguez-Uribeondo; Kokko, Harri. 2018. Parasitology. 145: 1210-1218
Observations of crayfish plague infections in commercially important narrow-clawed crayfish populations in Turkey
Kokko, Harri; Harlioglu, Muzaffer M; Aydin, Hamdi; Makkonen, Jenny; Gokmen, Gokhan; Aksu, Onder; Jussila, Japo. 2018. Knowledge and management of aquatic ecosystems. 419: 10
Rapustrategiat ja täplärapu
Ruokonen, Timo; Sjövik, Rosanna; Ercoli, Fabio; Erkamo, Esa; Tulonen, Jouni; Kokko, Harri; Jussila, Japo. 2018. Suomen Kalastuslehti. : 16-19
Reasons for large annual yield fluctuations in wild arctic bramble (Rubus arcticus ssp. arcticus) in Finland
Kostamo, Katri Hannele; Toljamo, Anna; Kokko, Harri; Kärenlampi, Sirpa; Rita, Hannu. 2018. Botany-botanique. 96: 695--703
Aphanomyces astaci isolate from latently infected stone crayfish (Austropotamobius torrentium) population is virulent
Jussila J, Vrezec A, Jaklic T, Kukkonen H, Makkonen J, Kokko H. 2017. Journal of invertebrate pathology. 149: 15-20
DNA barcode identification and virulence testing of Phytophthora spp. and Pythium spp. isolated from soil of strawberry fields
Toljamo AR, Grandlund L, Kokko HI. Teoksessa: Desjardins Y(toim.) , 2017. ISHS Acta Horticulturae 1156: VIII International Strawberry Symposium. s. 727-733. International Society for Horticultural Science
Investigation of ornamental crayfish reveals new carrier species of the crayfish plague pathogen (Aphanomyces astaci)
Panteleit Jörn, Keller Nina Sophie, Kokko Harri, Jussila Japo, Makkonen Jenny, Theissinger Kathrin, Schrimpf Anne. 2017. Aquatic invasions. 12: 77-83
Jokiravun piilevä rapurutto
Jussila Japo, Kokko Harri, Makkonen Jenny. 2017. Suomen Kalastuslehti. 124: 22-24
De Novo assembly and annotation of the freshwater crayfish Astacus astacus transcriptome
Theissinger Kathrin, Falckenhayn Cassandra, Blande Daniel, Toljamo Anna, Gutekunst Julian, Makkonen Jenny, Jussila Japo, Lyko Frank, Schrimpf Anne, Schulz Ralf, Kokko Harri. 2016. Marine genomics. 28: 7-10
Mitochondrial genomes and comparative genomics of Aphanomyces astaci and Aphanomyces invadans
Makkonen J, Vestarbacka A, Martin F, Jussila J, Diéguez-Uribeondo J, Kortet R, Kokko H. 2016. Scientific reports. 6: 36089
Oomycete-specific ITS primers for identification and metabarcoding
Riit Taavi, Tedersoo Leho, Drenkhan Rein, Runno-Paurson Eve, Kokko Harri, Anslan Sten. 2016. Mycokeys. 14: 17-30
Rapuruttoloinen - monimuotoinen ja muuntaumiskykyinen taudinaiheuttaja
Jussila J, Kokko H, Makkonen J, Vesterbacka A, Vainikka A, Kortet R. 2016. Luonnon tutkija. 120: 4-12
Reprogramming of Strawberry (Fragaria vesca) Root Transcriptome in Response to Phytophthora cactorum
Toljamo Anna, Blande Daniel, Kärenlampi Sirpa, Kokko Harri. 2016. PLoS ONE. 11: e0161078
Signal crayfish in Lake Saimaa could be maladapted to the local conditions due to Aphanomyces astaci infection: A seven year study
Jussila J, Tiitinen V, Edsman L, Kokko H, Fotedar R. 2016. Freshwater crayfish. 22: 53-60
Suomen jokiravuilla kapea perimä
Makkonen Jenny, Kokko Harri, Jussila Japo. 2016. Suomen Kalastuslehti. 123: 28-30
Chaos and Adaptation in the Pathogen-Host Relationship in Relation to the Conservation. The Case of the Crayfish Plague and the Noble Crayfish
Jussila Japo, Maguire Ivana, Kokko Harri, Makkonen Jenny. Teoksessa: Kawai Tadashi, Faulkes Zen, Scholtz Gerhard(toim.) , 2015. Freshwater Crayfish A Global Overview. s. 246-274. CRC press
Control of downy mildew (Peronospora sparsa) in arctic bramble (Rubus arcticus ssp. arcticus)
Kostamo K, Toljamo A, Palonen P, Valkonen JPT, Kärenlampi SO, Kokko H. 2015. Annals of applied biology. 167: 90-101
Eroded swimmeret syndrome in female crayfish Pacifastacus leniusculus associated with Aphanomyces astaci and Fusarium spp. infections
Edsman Lennart, Nyström Per, Sandström Alfred, Stenberg Marika, Kokko Harri, Tiitinen Vesa, Makkonen Jenny, Jussila Japo. 2015. Diseases of aquatic organisms. 112: 219-228
Invasive Crayfish and Their Invasive Diseases in Europe with the Focus on the Virulence Evolution of the Crayfish Plague
Jussila Japo, Vrezec Al, Makkonen Jenny, Kortet Raine, Kokko Harri. Teoksessa: Canning-Clode João(toim.) , 2015. Biological Invasions in Changing Ecosystems: Vectors, Ecological Impacts, Management and Predictions. s. 183-211. De Gruyter
It takes time to see the menu from the body: an experiment on stable isotope composition in freshwater crayfishes
Jussila J, Ruokonen T, Syväranta J, Kokko H, Vainikka A, Makkonen J, Kortet R. 2015. Knowledge and management of aquatic ecosystems. : 14 p
Mitochondrial cytochrome oxidase I gene analysis indicates a restricted genetic background in Finnish noble crayfish (Astacus astacus) stocks
Makkonen Jenny, Kokko Harri, Jussila Japo. 2015. Knowledge and management of aquatic ecosystems. 416: -
Rapujen sairaudet
Jussila J, Mannonen A, Jormanainen J, Nyström P, Sandström A, Stenberg M, Kokko H, Tiitinen V, Makkonen J, Edsman L. Teoksessa: Jormanainen J(toim.) , 2015. Suomalainen rapukirja. s. 48-57. Metsäkustannus
Täplärapukanta voi romahtaa
Jussila J, Makkonen J, Kokko H, Edsman L, Mäkinen P. 2015. Suomen Kalastuslehti. 122: 24-25
Crayfish plague dilemma: how to be a courteous killer?
Jussila Japo, Makkonen Jenny, Vainikka Anssi, Kortet Raine, Kokko Harri. 2014. Boreal environment research. 19: 235-244
Mansikan puna- ja tyvimädän torjuntakeinot ja herkän tunnistusmenetelmän kehittäminen
Mattila Hans, Kokko Harri. 2014. KASVINSUOJELULEHTI. 4: 108-111
Numerous Population Crashes of Wild Signal Crayfish (Pacifastacus leniusculus) in Southern Finland
Jussila J, Makkonen J, Kokko H, Mäkinen P. 2014. Freshwater crayfish. 20: 73-79
Practical disinfection chemicals for fishing and crayfishing gear against crayfish plague transfer
Jussila J, Toljamo A, Makkonen J, Kukkonen H, Kokko H. 2014. Knowledge and management of aquatic ecosystems. 413: 2
Pyrstöjalkatauti täpläravun riesana
Jussila J, Kokko H, Makkonen J, Nyström P, Sandström P, Stenberg M, Edsman L, Tiitinen V. 2014. Suomen Kalastuslehti. 121: 24-25
The signal crayfish is vulnerable to both the As and the PsI-isolates of the crayfish plague
Aydin H, Kokko H, Makkonen J, Kortet R, Kukkonen H, Jussila J. 2014. Knowledge and management of aquatic ecosystems. 413: 3
Täplärapukin kuolee rapuruttoon
Jussila J, Kokko H, Kukkonen H, Makkonen J, Aydin H. 2014. Suomen Kalastuslehti. 121: 22-23
Variation in resistance to the invasive crayfish plague and immune defence in the native noble crayfish
Gruber Christina, Kortet Raine, Vainikka Anssi, Jussila Japo, Makkonen Jenny, Kokko Harri, Hirvonen Heikki. 2014. Annales zoologici Fennici. 51: 371-381
Även signalkräfot dör i kräftpest
Jussila J, Kokko H, Kukkonen H, Makkonen J, Aydin H. 2014. Fiskeritidskrift för Finland. 58: 14-15
A simple and efficient cooling method for post-harvest transport of the commercial crayfish catch
Jussila J, Tiitinen V, Fotedar R, Kokko H. 2013. Freshwater crayfish. 19: 15-19
Aphanomyces astaci PsI-genotype isolates from different Finnish signal crayfish stocks show variation in their virulence but still kill fast
Jussila J, Kokko H, Kortet R, Makkonen J. 2013. Knowledge and management of aquatic ecosystems. 411: 10
Aphanomyces astaci isolates express several RxLR effector genes
Kokko H, Vetrerbacka A, Blande D, Makkonen J, Kortet R, Vainikka A, Jussila j. 2013.
Crayfish plague pathogen Aphanomyces astaci - Genetic diversity and adaptation to the host species
Makkonen J, Kokko H, Vainikka A, Kortet R, Jussila J. 2013.
Crayfish plague pathogen Aphanomyces astaci - Genetic diversity and adaptation to the host species
Makkonen J, Kokko H, Kortet R, Vainikka A, Jussila J. 2013.
Dose-dependent mortality of the noble crayfish (Astacus astacus) to different strains of the crayfish plague (Aphanomyces astaci)
Makkonen J, Kokko H, Vainikka A, Kortet R, Jussila J. 2013. Journal of invertebrate pathology. 115: 86-91
Fusarium avenaceum causes burn spot disease syndrome in noble crayfish (Astacus astacus)
Makkonen J, Jussila J, Koistinen L, Paaver T, Hurt M, Kokko H. 2013. Journal of invertebrate pathology. 113: 184-190
Microsatellite markers reveal clear geographic structuring among threatened noble crayfish (Astacus astacus) populations in Northern and Central Europe
Gross R, Palm S, Koiv K, Prestegaard T, Jussila J, Paaver T, Geist J, Kokko H, Karjalainen A, Edsman L. 2013. Conservation genetics. 14: 809-821
Morphological and molecular identification to secure cultivar maintenance and management of self-sterile Rubus arcticus
Kostamo K, Toljamo A, Antonius K, Kokko H, Kärenlampi SO. 2013. Annals of botany. 111: 713-721
Practical disinfectants against crayfish plague spores
Jussila J, Makkonen J, Toljamo A, Kokko H. 2013.
Rapid influx and numerous epidemics of Aphanomyces astaci strains are altering the European crayfish distribution and biodiversity
Kokko H, Makkonen J, Blande D, Vainikka A, Kortet R, Vesterbacka A, Granlund L, Jussila J. 2013.
Rapulaatikko - rei'illä vai ilman?
Aydin H, Jussila J, Kokko H, Tiitinen V. 2013. Suomen Kalastuslehti. 120: 28-30
Signal crayfish are susceptible to crayfish plague infection under physiological challenge
Aydin H, Kokko H, Makkonen J, Jussila J. 2013.
Suomalaisten jokirapukantojen monimuotoisuus
Makkonen J, Kokko H, Vainikka A, Kortet R, Jussila J. 2013.
The selection and domestication of wild berries ¿ current status of arctic bramble (Rubus arcticus)
Kokko H. 2013.
Differences in the virulence of crayfish plague (Aphanomyces astaci) strains confirmed with infection trials
Makkonen J, Kokko H, Vainikka A, Kortet R, Jussila J. 2012.
Differing virulence of Aphanomyces astaci isolates and elevated resistance of noble crayfish Astacus astacus against crayfish plague
Makkonen J, Jussila J, Kortet R, Vainikka A, Kokko H. 2012. Diseases of aquatic organisms. 102: 129-136
Herbivore-induced aspen volatiles temporally regulate two different indirect defences in neighbouring plants
Li Tao, Holopainen Jarmo, Kokko Harri, Tervahauta Arja, Blande James. 2012. Functional ecology. 26: 1176-1185
Jokiravun ja rapuruton suhde -väitöskirjatyön tuloksia
Makkonen J, Kokko H, Vainikka A, Kortet R, Jussila J. 2012.
Mesimarja soveltuu katettuun tuotantoon
Tommila T, Mäkelä T, Palonen P, Junttila O, Kokko H, Hytönen T. 2012. PUUTARHA & KAUPPA. 9: 12
Monitoring the spore dynamics of Aphanomyces astaci in the ambient water of latent carrier crayfish
Strand DA, Jussila J, Viljamaa-Dirks S, Kokko H, Makkonen J, Holst-Jensen A, Viljugrein H, Vrålstad T. 2012. Veterinary microbiology. 160: 99-107
Recovering Turkish narrow clawed crayfish (Astacus leptodactylus) populations carry Aphanomyces astaci
Kokko H, Koistinen L, Harlioglu M, Makkonen J, Aydin H, Jussila J. 2012. Knowledge and management of aquatic ecosystems. 404: 12: 1-7
The diversity of the pathogenic Oomycete (Aphanomyces astaci) chitinase genes within the genotypes indicate adaptation to its hosts
Makkonen J, Jussila J, Kokko H. 2012. Fungal genetics and biology. 49: 635-642
Timing and quantifying Aphanomyces astaci sporulation from the noble crayfish suffering from the crayfish plague
Makkonen J, Strand DA, Kokko H, Vrålstad T, Jussila J. 2012. Veterinary microbiology. :
To be or not to be a pathogen: co-evolution of crayfish plague (Aphanomyces astaci) and its native European crayfish hosts
Jussila, J., Makkonen, J., Kortet, R., Vainikka, A., Kokko, H.. 2012.
To be or not to be a pathogen: co-evolution of crayfish plague (Aphanomyces astaci) and its native European crayfish hosts
Jussila, J., Makkonen, J., Kortet, R., Vainikka, A., Kokko, H.. 2012.
Uudessa marjahankkeessa kehitetään tunnelituotantoa
Hytönen T, Palonen P, Valkonen J, Laine A-L, Elomaa P, Kärenlampi S, Kokko H, Kostamo K, Karhu S, Koivisto A, Tuovinen T, Uosukainen M.. 2012. PUUTARHA & KAUPPA. 23: 32
Uutta viljelytekniikkaa mesimarjalle
Kokko Harri, Toljamo Anna, Kostamo Katri, Kärenlampi Sirpa. 2012. PUUTARHA & KAUPPA. : 32
Crayfish plague diversity
Kokko Harri. 2011.
Genetic variation in the ribosomal internal transcribed spacers of Aphanomyces astaci Schikora from Finland
Makkonen, J., Jussila, J., Henttonen, P., Kokko, H.. 2011. Aquaculture. 311: 48,53
High diversity of A. astaci chitinase genes after the host jumps
Makkonen J, Jussila J, Henttonen P, Kokko H. 2011.
Host-pathogen interactions: the search of oomycete effectors by next generation sequencing of transcriptomes
KOKKO H, MAKKONEN J, VAINIKKA A, KORTET R, JUSSILA J. 2011.
Inheritance of ITS1 region microsatellite-like repeats in the noble crayfish, Astacus astacus (Decapoda, Astacidea)
Alaranta, A., Jussila, J., Kokko, H.. 2011. Crustaceana. 84: 1325-1336
Latent crayfish plague (Aphanomyces astaci) infection in a robust wild noble crayfish (Astacus astacus) population
Jussila, J., Makkonen, J., Vainikka, A., Kortet, R., Kokko, H.. 2011. Aquaculture. 321: 17-20
Omenaruven torjuntaan kestävin lajikkein
Kokko Harri, Nissinen Mikko. 2011. PUUTARHA & KAUPPA. : 16
Peracetic acid (PAA) treatment is an effective disinfectant against crayfish plague (Aphanomyces astaci) spores in aquaculture
Jussila, J., Makkonen, J., Kokko, H.. 2011. Aquaculture. 320: 37-42
Crayfish plague (Aphanomyces astaci) is vertically transferred during artificial incubation of crayfish eggs ¿ preliminary results
Makkonen, J., Kokko, H., Henttonen, P., Jussila, J.. 2010. Freshwater crayfish. 17: 151-154
Raputaudit haasteena
Jussila, J., Kortet, R., Kokko, H., Henttonen, P., Makkonen, J., Vainikka, A.. 2010. Suomen Kalastuslehti. 6: 16-19
Several fungi isolated from Saaremaa (Estonia) noble crayfish (Astacus astacus) with melanised spots
Makkonen, J., Kokko, H., Henttonen, P., Kivistik, M., Hurt, M., Paaver, T., Jussila, J.. 2010. Freshwater crayfish. 17: 155-158
NMR and UPLC-qTOF-MS/MS characterisation of novel phenylethanol derivates of phenylpropanoid glucosides from the leaves of strawberry (Fragaria x ananassa cv. Jonsok)
Hanhineva K, Soininen P, Anttonen MJ, Kokko H, Rogachev I, Aharoni A, Laatikainen R, Kärenlampi S. 2009. Phytochemical analysis. : 353-364
NMR and UPLC-qTOF-MS/MS characterisation of novel phenylethanol derivatives of phenylpropanoid glucosides from the leaves of strawberry (Fragaria x ananassa cv. Jonsok)
Hanhineva K, Soininen P, Anttonen MJ, Kokko H, Rogachev I, Aharoni A, Laatikainen R & Kärenlampi S. 2009. Phytochemical analysis. 20: 353-364
Stilbene synthase gene transfer caused alterations in the phenylpropanoid metabolism of transgenic strawberry (Fragaria x ananassa)
Hanhineva K, Kokko H, Siljanen H, Rogachev I, Aharoni A & Kärenlampi SO. 2009. Journal of experimental botany. 60: 2093-2106
Stilbene synthase gene transfer resulted in down regulation of endogenous chalcone synthase in strawberry (Fragaria x ananassa) and led to the identification of novel phenylpropanoid glucosides
Hanhineva K, Anttonen MJ, Kokko H, Soininen P, Laatikainen R, Kärenlampi S, Rogachev I, Aharoni A. Teoksessa: Hanke M-V, Dunemann F, Flachowsky H(toim.) , 2009. Proceedings of the First International Symposium on Biotechnology of Fruit Species Bioftechfruit 2008. s. 673-679. International Society for Horticultural Science
Benzothiadiazole affects the leaf proteome in arctic bramble (Rubus arcticus)
Hukkanen A, Kokko H, Buchala A, Häyrinen J, Kärenlampi S. 2008. Molecular plant pathology. 9: 799-808
Impact of agrochemicals on Peronospora sparsa and phenolic profiles in three Rubus arcticus cultivars
Hukkanen A, Kostamo K, Kärenlampi S, Kokko H. 2008. Journal of agricultural and food chemistry. 56: 1008-1016
Kuopion yliopiston tutkimuspuutarha
Kärenlampi L, Silvennoinen S, Kokko H, Kärenlampi S. Teoksessa: Väre H, Koponen A, Hämet-Ahti L, Hagman M, Raisio J(toim.) , 2008. Puiden jäljillä. 400 vuotta dendrologian historiaa. s. 188-190. Dendrologian Seura - Dendrologiska Sällskapet r.y.
Non-targeted analysis of spatial metabolite composition in strawberry (Fragaria x ananassa) flowers
Hanhineva K, Rogachev I, Kokko H, Mintz-Oron S, Venger I, Kärenlampi S, Aharoni A. 2008. Phytochemistry. 69: 2463-2481
Benzothiadiazole induces the accumulation of phenolics and improves resistance to powdery mildew in strawberries
Hukkanen AT, Kokko HI, Buchala AJ, McDougall GJ, Stewart D, Kärenlampi SO, Karjalainen RO. 2007. Journal of agricultural and food chemistry. 55: 1862-1870
Generation of genetically modified strawberries in temporary immersion bioreactor system
Hanhineva K, Kokko H, Kärenlampi S. Teoksessa: Xu Z, Li J, Xue Y, Yang W(toim.) , 2007. Biotechnology and Sustainable Agriculture 2006 and Beyond. Proceedings of the 11th IAPTC&B Congress. s. 115-118. Springer
Mesimarjan viljelyssä tarvitaan tutkimus- ja koetoimintaa
Hukkanen A, Kokko H, Kostamo K, Kärenlampi S. 2007. PUUTARHA & KAUPPA. 5: 5
Antioxidant capacity and phenolic content of sweet rowanberries
Hukkanen AT, Pölönen SS, Kärenlampi SO, Kokko HI. 2006. Journal of agricultural and food chemistry. 54: 112-119
Genetic differences among noble crayfish (Astacus astacus) stocks in Finland, Sweden and Estonia based on the ITS1 region
Alaranta A, Henttonen P, Jussila J, Kokko H, Prestegaard T, Edsman L, Halmekytö M. 2006. BULLETIN FRANCAIS DE LA PECHE ET DE LA PISCICULTURE. 380-381: 965-976
Quantification of downy mildew (Peronospora sparsa) in Rubus species using real-time PCR
Hukkanen A, Pietikäinen L, Kärenlampi S, Kokko H. 2006. European journal of plant pathology. 116: 225-235
Analysis of bean (Phaseolus vulgaris L.) proteins affected by copper stress
Cuypers A, Koistinen KM, Kokko H, Kärenlampi S, Auriola S, Vangronsveld J. 2005. Journal of plant physiology. : 383-392
Comparison of tuber proteomes of potato varieties, landraces, and genetically modified lines
Lehesranta SJ, Davies HV, Shepherd LVT, Nunan N, McNicol JW, Auriola S, Koistinen KM, Suomalainen S, Kokko HI, Kärenlampi SO. 2005. Plant physiology. 138: 1690-1699
Marjat - pohjolan kultaa, Berries - gold of north
Kokko H, Toivonen K,Hukkanen A, Laitinen M-L, Kärenlampi S. 2005.
Rubus fruit juices affect lipid peroxidation in a Drosophila melanogaster model in vivo
Mylnikov SV, Kokko HI, Kärenlampi SO, Oparina TI, Davies HV, Stewart D. 2005. Journal of agricultural and food chemistry. 53: 7728-7733
Shoot regeneration from leaf explants of five strawberry (Fragaria x ananassa) cultivars in temporary immersion bioreactor system
Hanhineva K, Kokko H, Kärenlampi S. 2005. In vitro cellular and developmental biology: plant. 41: 826-831
Revegetation of peatland for cloudberry cultivation
Kokko H, Teittinen H, Kärenlampi S. Teoksessa: Päivänen J(toim.) , 2004. Wise Use of Peatlands. Proceedings of the12th International Peat Congress. s. 379-382. International Peat Society
Variation in flavonol content among berry cultivars grown under Northern conditions
Hukkanen A, Anttonen M, Kokko H, Kärenlampi S, Karjalainen R. Teoksessa: Hicklenton P, Maas J(toim.) , 2003. XXVI International Horticultural Congress: Berry Crop Breeding, Production and Utilization for a New Century. s. 45-50.
Birch PR-10c is induced by factors causing oxidative stress but appears not to confer tolerance to these agents
Koistinen KM, Hassinen VH, Gynther PAM, Lehesranta SJ, Keinänen SI, Kokko HI, Oksanen EJ, Tervahauta AI, Auriola S, Kärenlampi SO. 2002. New phytologist. 155: 381-391
Flavonoid content in strawberry cultivars
Mikkonen TP, Hukkanen AT, Määttä KR, Kokko HI, Törrönen AR, Kärenlampi SO, Karjalainen RO. Teoksessa: Hietaranta T, Linna M-M, Palonen P, Parikka P(toim.) , 2002. Proceedings of the Fourth International Strawberry Symposium. s. 815-818. ISHS
Heräteaineet ja fenoliyhdisteet kasvitautien torjunnassa
Karjalainen R, Hukkanen A, Anttonen M, Tiilikkala K, Kokko H, Kärenlampi S. Teoksessa: Tiilikkala K(toim.) , 2002. Biotorjunta osana ekologista kasvinsuojelua. s. 78. MTT
Stress-related RNase PR-10c is post-translationally modified by glutathione in birch
Koistinen KM, Kokko HI, Hassinen VH, Tervahauta AI, Auriola S, Kärenlampi SO. 2002. Plant cell and environment. 25: 707-715
Flavonol content varies among black currant cultivars
Mikkonen TP, Määttä KR, Hukkanen AT, Kokko HI, Törrönen AR, Kärenlampi SO, Karjalainen RO. 2001. Journal of agricultural and food chemistry. 49: 3274-3277
Genotypic variation in growth and physiological responses of Finnish hybrid aspen (Populus tremuloides x P. tremula) to elevated tropospheric ozone concentration
Oksanen E, Amores G, Kokko H, Santamaria JM, Kärenlampi L. 2001. Tree physiology. 21: 1171-1181
Comparisons of some properties of two laboratory variants of Raspberry bushy dwarf virus (RBDV) with those of three previously characterised RBDV isolates
Jones AT, McGavin WJ, Mayo MA, Angel-Diaz JE, Kärenlampi SO, Kokko H. 2000. European journal of plant pathology. 106: 623-632
Members of the amylovora group of Erwinia are cellulolytic and possess genes homologous to the type II secretion pathway
Riekki R, Palomäki T, Virtaharju O, Kokko H, Romantschuk M, Saarilahti HT. 2000. Molecular genetics and genomics. 263: 1031-1037
Downy mildew (Peronospora rubi) in Rubus arcticus: a threat to commercial berry production in Finland
Kokko H, Virtaharju O, Kärenlampi S, Cooke DEL, Williams NA, Williamson B. Teoksessa: McGregor GR, Hall HK, Langford GI(toim.) , 1999. Proceedings of the Seventh International Rubus Ribes Symposium. s. 137-141. International Society for Horticultural Science
S-RNases in apple are expressed in the pistil along the pollen tube growth path
Certal AC, Sanchez AM, Kokko H, Broothaerts W, Oliveira MM, Feijo JA. 1999. Sexual plant reproduction. 12: 94-98
Induction of genes for the stress proteins PR-10 and PAL in relation to growth, visible injuries and stomatal conductance in birch (Betula pendula) clones exposed to ozone and/or drought
Pääkkönen E, Seppänen S, Holopainen T, Kokko H, Kärenlampi S, Kärenlampi L, Kangasjärvi J. 1998. New phytologist. 138: 295-305
Lehtihome ja peltolude mesimarjan kuivumisongelman aiheuttajina
Kokko H, Kärenlampi S, Hämäläinen J, Holopainen J. 1998. PUUTARHA & KAUPPA. : 4-5
PR-10 protein is induced by copper stress in roots and leaves of a Cu/Zn tolerant clone of birch, Betula pendula
Utriainen M, Kokko H, Auriola S, Sarrazin O, Kärenlampi S. 1998. Plant cell and environment. 21: 821-828
Rapid production of antibodies in chicken and isolation from eggs
Kokko H, Kuronen I, Kärenlampi S. Teoksessa: Celis JE(toim.) , 1998. Cell Biology. A Laboratory Handbook. 2nd ed.. s. 410-417. Academic Press
Transformation of arctic bramble (Rubus arcticus L.) by Agrobacterium tumefaciens
Kokko HI, Kärenlampi SO. 1998. Plant cell reports. 17: 822-826
Update to: Identification of RNA virus isolates after IC-RT-PCR by direct sequencing using biotinylated and M13 universal tailed primers
Kokko HI, Kärenlampi SO. Teoksessa: Siebert P(toim.) , 1998. The PCR Technique: RT-PCR. s. 217-219. BioTechniques Books (Eaton Publishing)
Hen egg yolk antibodies purified by Antigen affinity under highly alkaline conditions provide new tools for diagnostics,human intact paratyrin as a model antigen
Kuronen I, Kokko H, Mononen I, Parviainen M. 1997. Clinical chemistry and laboratory medicine. 35: 435-440
New host for raspberry bushy dwarf virus: arctic bramble (Rubus arcticus)
Kokko H, Lemmetty A, Haimi P, Kärenlampi S. 1996. European journal of plant pathology. 102: 713-717
Single-step immunocapture RT-PCR in the detection of raspberry bushy dwarf virus
Kokko HI, Kivineva M, Kärenlampi SO. 1996. Biotechniques. 20: 842-846
Forest-related ozone studies in the University of Kuopio. Challenges at molecular, physiological and ecological level
Kärenlampi L, Anttonen S, Holopainen T, Holopainen J, Kainulainen P, Kangasjärvi J, Kokko H, Kärenlampi S, Palomäki V, Pellinen R, Pääkkönen E, Rantanen L, Tarhanen S, Tuomainen J, Wulff A. 1995. ILMANSUOJELU-LEHTI. 3: 12-18
Kuopion yliopiston puutarhatutkimus
Kärenlampi S, Häkkinen S, Kokko H. 1995. PUUTARHA. 98: 446-449
Sugars and organic acids in clones and cultivars of arctic bramble and hybrid. Sensory evaluation of juices and jellies
Häkkinen S, Kokko H, Kärenlampi S. 1995. AGRICULTURAL AND FOOD SCIENCE IN FINLAND. 4: 385-395
Two-site enzyme immunoassay for measuring intact human ostecalcin in serum
Parviainen M, Kuronen I, Kokko H, Lakaniemi M, Savolainen K, Mononen I. 1994. Journal of bone and mineral research. 9: 347-354
Production of monoclonal and polyclonal antibodies against human osteocalcin sequences and development of a two-site ELISA for intact human osteocalcin
Kuronen I, Kokko H, Parviainen M. 1993. Journal of immunological methods. 163: 233-240
Antibody from hen's eggs against a concerved sequence of the gametophytic self-incompatibility proteins of plants
Kokko H, Kärenlampi S. 1992. Analytical biochemistry. 201: 311-318
Detection of mobile proteins by proton nuclear magnetic resonance spectroscopy in the guinea pig brain ex vivo and their partial purification
Kauppinen RA, Kokko H, Williams SR. 1992. Journal of neurochemistry. 58: 967-974
Detection of thymosin beta-4 in Situ in a guinea pig cerebral cortex preparation using 1H NMR spectroscopy
Kauppinen RA, Nissinen T, Kärkkäinen AM, Pirttilä TRM, Palvimo J, Kokko H, Williams SR. 1992. Journal of biological chemistry. 267: 9905-9910

University of Eastern Finland Joensuu, Kuopio © University of Eastern Finland

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Harri Kokko

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Keywords

Non-invasive assessment and visualization of Phytophthora cactorum infection in strawberry crowns using quantitative magnetic resonance imaging

Dynamics and distribution of nitrogen and carbon from fish feed in aquaponic system estimated using stable isotopes and biomass measurements

Nitrogen and carbon dynamics and circulation in the aquaponic system followed using 13C and 15N isotopes

Coir, wood shavings and peat as growth substrates for arctic bramble

Raputilanne selville pelkästä vesinäytteestä?

Sphagnum moss is a promising growth substrate in arctic bramble container cultivation

Controlled Infection Experiment With Aphanomyces astaci Provides Additional Evidence for Latent Infections and Resistance in Freshwater Crayfish

Eroded Swimmeret Syndrome: Update of the Current Knowledge

Is Aphanomyces astaci Loosing its Stamina: A Latent Crayfish Plague Disease Agent From Lake Venesjärvi, Finland

Jokirapujen ja täplärapujen esiintymisen selvittäminen eDNA-menetelmällä

Terpenoid and lipid profiles vary in different Phytophthora cactorum - strawberry interactions

Development and evaluation of a recombinase polymerase amplification assay for rapid detection strawberry red stele pathogen

Narrow-clawed crayfish in Finland: Aphanomyces astaci resistance and genetic relationship to other selected European and Asian populations

RPA-PCR couple: an approach to expedite plant diagnostics and overcome PCR inhibitors

Expression of GAF sensor, CAZymes, elicitins, and RXLRs differs markedly between two Phytophthora cactorum isolates

Mapping 15 years of crayfish plague in the Iberian Peninsula: The impact of two invasive species on the endangered native crayfish

Recombinase Polymerase Amplification Assay for fast, sensitive and on-site detection of Phytophthora cactorum without DNA extraction

The signal crayfish (Pacifastacus leniusculus) in Lake Tahoe (USA) hosts multiple Aphanomyces species

Crayfish plague in Japan: A real threat to the endemic Cambaroides japonicus

Genome-wide divergence patterns support fine-scaled genetic structuring associated with migration tendency in brown trout

Introduced alien signal crayfish (Pacifastacus leniusculus) in Finland - uncontrollable expansion despite numerous crayfisheries strategies

MtDNA allows the sensitive detection and haplotyping of the crayfish plague disease agent Aphanomyces astaci showing clues about its origin and migration

Observations of crayfish plague infections in commercially important narrow-clawed crayfish populations in Turkey

Rapustrategiat ja täplärapu

Reasons for large annual yield fluctuations in wild arctic bramble (Rubus arcticus ssp. arcticus) in Finland

Aphanomyces astaci isolate from latently infected stone crayfish (Austropotamobius torrentium) population is virulent

DNA barcode identification and virulence testing of Phytophthora spp. and Pythium spp. isolated from soil of strawberry fields

Investigation of ornamental crayfish reveals new carrier species of the crayfish plague pathogen (Aphanomyces astaci)

Jokiravun piilevä rapurutto

De Novo assembly and annotation of the freshwater crayfish Astacus astacus transcriptome

Mitochondrial genomes and comparative genomics of Aphanomyces astaci and Aphanomyces invadans

Oomycete-specific ITS primers for identification and metabarcoding

Rapuruttoloinen - monimuotoinen ja muuntaumiskykyinen taudinaiheuttaja

Reprogramming of Strawberry (Fragaria vesca) Root Transcriptome in Response to Phytophthora cactorum

Signal crayfish in Lake Saimaa could be maladapted to the local conditions due to Aphanomyces astaci infection: A seven year study

Suomen jokiravuilla kapea perimä

Chaos and Adaptation in the Pathogen-Host Relationship in Relation to the Conservation. The Case of the Crayfish Plague and the Noble Crayfish

Control of downy mildew (Peronospora sparsa) in arctic bramble (Rubus arcticus ssp. arcticus)

Eroded swimmeret syndrome in female crayfish Pacifastacus leniusculus associated with Aphanomyces astaci and Fusarium spp. infections

Invasive Crayfish and Their Invasive Diseases in Europe with the Focus on the Virulence Evolution of the Crayfish Plague

It takes time to see the menu from the body: an experiment on stable isotope composition in freshwater crayfishes

Mitochondrial cytochrome oxidase I gene analysis indicates a restricted genetic background in Finnish noble crayfish (Astacus astacus) stocks

Rapujen sairaudet

Täplärapukanta voi romahtaa

Crayfish plague dilemma: how to be a courteous killer?

Mansikan puna- ja tyvimädän torjuntakeinot ja herkän tunnistusmenetelmän kehittäminen

Numerous Population Crashes of Wild Signal Crayfish (Pacifastacus leniusculus) in Southern Finland

Practical disinfection chemicals for fishing and crayfishing gear against crayfish plague transfer

Pyrstöjalkatauti täpläravun riesana

The signal crayfish is vulnerable to both the As and the PsI-isolates of the crayfish plague

Täplärapukin kuolee rapuruttoon

Variation in resistance to the invasive crayfish plague and immune defence in the native noble crayfish

Även signalkräfot dör i kräftpest

A simple and efficient cooling method for post-harvest transport of the commercial crayfish catch

Aphanomyces astaci PsI-genotype isolates from different Finnish signal crayfish stocks show variation in their virulence but still kill fast

Aphanomyces astaci isolates express several RxLR effector genes

Crayfish plague pathogen Aphanomyces astaci - Genetic diversity and adaptation to the host species

Crayfish plague pathogen Aphanomyces astaci - Genetic diversity and adaptation to the host species

Dose-dependent mortality of the noble crayfish (Astacus astacus) to different strains of the crayfish plague (Aphanomyces astaci)

Fusarium avenaceum causes burn spot disease syndrome in noble crayfish (Astacus astacus)

Microsatellite markers reveal clear geographic structuring among threatened noble crayfish (Astacus astacus) populations in Northern and Central Europe

Morphological and molecular identification to secure cultivar maintenance and management of self-sterile Rubus arcticus

Practical disinfectants against crayfish plague spores

Rapid influx and numerous epidemics of Aphanomyces astaci strains are altering the European crayfish distribution and biodiversity

Rapulaatikko - rei'illä vai ilman?

Signal crayfish are susceptible to crayfish plague infection under physiological challenge

Suomalaisten jokirapukantojen monimuotoisuus

The selection and domestication of wild berries ¿ current status of arctic bramble (Rubus arcticus)

Differences in the virulence of crayfish plague (Aphanomyces astaci) strains confirmed with infection trials

Differing virulence of Aphanomyces astaci isolates and elevated resistance of noble crayfish Astacus astacus against crayfish plague

Herbivore-induced aspen volatiles temporally regulate two different indirect defences in neighbouring plants

Jokiravun ja rapuruton suhde -väitöskirjatyön tuloksia

Mesimarja soveltuu katettuun tuotantoon

Monitoring the spore dynamics of Aphanomyces astaci in the ambient water of latent carrier crayfish

Recovering Turkish narrow clawed crayfish (Astacus leptodactylus) populations carry Aphanomyces astaci