HARRI KOKKO

Contact info

Research groups - UEF

• 
  Plant biology
• 
  The research group of Aquatic Ecology and Behavioural Ecology

Publications

• Francesconi, Caterina; Makkonen, Jenny; Schrimpf, Anne; Jussila, Japo; Kokko, Harri; Theissinger, Kathrin. 2021. Controlled Infection Experiment With Aphanomyces astaci Provides Additional Evidence for Latent Infections and Resistance in Freshwater Crayfish Frontiers in ecology and evolution 9: 647037. 2021
• Toljamo, Anna; Koistinen, Ville; Hanhineva, Kati; Kärenlampi, Sirpa; Kokko, Harri. 2021. Terpenoid and lipid profiles vary in different Phytophthora cactorum - strawberry interactions Phytochemistry 189: 112820. 2021
• Jokirapujen ja täplärapujen esiintymisen selvittäminen eDNA-menetelmällä. Mäkinen, Mikko; Jussila, Japo; Sjövik, Rosanna; Ventelä, Emmi; Kokko, Harri; Pesonen, Aake; Ruokonen, Timo J. 2021 2021
• Jussila, J; Francesconi, C; Theissinger, K; Kokko, H; Makkonen, J. 2021. Is Aphanomyces astaci Loosing its Stamina: A Latent Crayfish Plague Disease Agent From Lake Venesjärvi, Finland Freshwater crayfish 26 2: 139-144. 2021
• Jussila, Japo; Tiitinen, Vesa; Makkonen, Jenny; Kokko, Harri; Bohman, Patrik; Edsman, Lennart. 2021. Eroded Swimmeret Syndrome: Update of the Current Knowledge Freshwater crayfish 26 1: 63-68. 2021
• Jussila, Japo; Maguire, Ivana; Kokko, Harri; Tiitinen, Vesa; Makkonen, Jenny. 2020. Narrow-clawed crayfish in Finland: Aphanomyces astaci resistance and genetic relationship to other selected European and Asian populations Knowledge and management of aquatic ecosystems 421: 1-9. 2020
• Munawar, MA; Martin, F; Toljamo, A; Kokko, H; Oksanen, E. 2020. RPA-PCR couple: an approach to expedite plant diagnostics and overcome PCR inhibitors Biotechniques 69 4: 271-281. 2020
• Munawar, Mustafa Ahmad; Toljamo, Anna; Martin, Frank; Oksanen, Elina; Kokko, Harri. 2020. Development and evaluation of a recombinase polymerase amplification assay for rapid detection strawberry red stele pathogen Phytopathology research 2: 26. 2020
• Makkonen, J; Kokko, H; Gökmen, G; Ward, J; Umek, J; Kortet, R; Petrusek, A; Jussila, J. 2019. The signal crayfish (Pacifastacus leniusculus) in Lake Tahoe (USA) hosts multiple Aphanomyces species Journal of invertebrate pathology 166: 107218. 2019
• Martín-Torrijos, L; Kokko, H; Makkonen, J; Jussila, J; Diéguez-Uribeondo, J. 2019. Mapping 15 years of crayfish plague in the Iberian Peninsula: The impact of two invasive species on the endangered native crayfish PLoS ONE 14 8: e0219223. 2019
• Munawar, M; Toljamo, A; Martin, F; Kokko, H. 2019. Recombinase Polymerase Amplification Assay for fast, sensitive and on-site detection of Phytophthora cactorum without DNA extraction European journal of horticultural science 84 1: 14-19. 2019
• Toljamo, Anna; Blande, Daniel; Munawar, Mustafa Ahmad; Kärenlampi, Sirpa; Kokko, Harri. 2019. Expression of GAF sensor, CAZymes, elicitins, and RXLRs differs markedly between two Phytophthora cactorum isolates Phytopathology 109 5: 726-735. 2019
• Martín-Torrijos, L; Kawai, T; Makkonen, J; Jussila, J; Kokko, H; Diéguez-Uribeondo, J. 2018. Crayfish plague in Japan: A real threat to the endemic Cambaroides japonicus. PLOS ONE 13 4: e0195353. 2018
• Ruokonen, Timo; Sjövik, Rosanna; Ercoli, Fabio; Erkamo, Esa; Tulonen, Jouni; Kokko, Harri; Jussila, Japo. 2018. Rapustrategiat ja täplärapu. SUOMEN KALASTUSLEHTI 5: 16-19. 2018
• Ruokonen, Timo J; Sjövik, Rosanna; Erkamo, Esa; Tulonen, Jouni; Ercoli, Fabio; Kokko, Harri; Jussila, Japo. 2018. Introduced alien signal crayfish (Pacifastacus leniusculus) in Finland - uncontrollable expansion despite numerous crayfisheries strategies. Knowledge and Management of Aquatic Ecosystems 419: 27. 2018
• Makkonen, Jenny; Jussila, Japo; Panteleit, Jörn; Keller, Nina Sophie; Schrimpf, Anne; Theissinger, Kathrin; Kortet, Raine; Martín-Torrijos, Laura; Sandoval-Sierra, Jose Vladimir; Javier, Diéguez-Uribeondo; Kokko, Harri. 2018. MtDNA allows the sensitive detection and haplotyping of the crayfish plague disease agent Aphanomyces astaci showing clues about its origin and migration Parasitology 145 9: 1210-1218. 2018
• Kostamo, Katri Hannele; Toljamo, Anna; Kokko, Harri; Kärenlampi, Sirpa; Rita, Hannu. 2018. Reasons for large annual yield fluctuations in wild arctic bramble (Rubus arcticus ssp. arcticus) in Finland Botany 96 10: 695--703. 2018
• Kokko, Harri; Harlioglu, Muzaffer M; Aydin, Hamdi; Makkonen, Jenny; Gokmen, Gokhan; Aksu, Onder; Jussila, Japo. 2018. Observations of crayfish plague infections in commercially important narrow-clawed crayfish populations in Turkey. Knowledge and Management of Aquatic Ecosystems 419: 10. 2018
• Lemopoulos, Alexandre; Uusi-Heikkilä, Silva; Vasemagi, Anti; Huusko, Ari; Kokko, Harri; Vainikka, Anssi. 2018. Genome-wide divergence patterns support fine-scaled genetic structuring associated with migration tendency in brown trout CANADIAN JOURNAL OF FISHERIES AND AQUATIC SCIENCES 75 10: 1680-1692. 2018
• Jussila J, Vrezec A, Jaklic T, Kukkonen H, Makkonen J, Kokko H. 2017. Aphanomyces astaci isolate from latently infected stone crayfish (Austropotamobius torrentium) population is virulent. JOURNAL OF INVERTEBRATE PATHOLOGY 149 October 2017: 15-20. 2017
• Jussila Japo, Kokko Harri, Makkonen Jenny. 2017. Jokiravun piilevä rapurutto. SUOMEN KALASTUSLEHTI 124 5: 22-24. 2017
• Panteleit Jörn, Keller Nina Sophie, Kokko Harri, Jussila Japo, Makkonen Jenny, Theissinger Kathrin, Schrimpf Anne. 2017. Investigation of ornamental crayfish reveals new carrier species of the crayfish plague pathogen (Aphanomyces astaci). Aquatic Invasions 12 1: 77-83. 2017
• Toljamo AR, Grandlund L, Kokko HI. 2017. DNA barcode identification and virulence testing of Phytophthora spp. and Pythium spp. isolated from soil of strawberry fields. In: Desjardins Y (ed.) , ISHS Acta Horticulturae 1156: VIII International Strawberry Symposium. International Society for Horticultural Science. Acta Horticulturae 1156. s. 727-733. 2017
• Riit Taavi, Tedersoo Leho, Drenkhan Rein, Runno-Paurson Eve, Kokko Harri, Anslan Sten. 2016. Oomycete-specific ITS primers for identification and metabarcoding. Mycokeys 14: 17-30. 2016
• Toljamo Anna, Blande Daniel, Kärenlampi Sirpa, Kokko Harri. 2016. Reprogramming of Strawberry (Fragaria vesca) Root Transcriptome in Response to Phytophthora cactorum. PLOS ONE 11 8: e0161078. 2016
• Theissinger Kathrin, Falckenhayn Cassandra, Blande Daniel, Toljamo Anna, Gutekunst Julian, Makkonen Jenny, Jussila Japo, Lyko Frank, Schrimpf Anne, Schulz Ralf, Kokko Harri. 2016. De Novo assembly and annotation of the freshwater crayfish Astacus astacus transcriptome. Marine genomics 28: 7-10. 2016
• Jussila J, Kokko H, Makkonen J, Vesterbacka A, Vainikka A, Kortet R. 2016. Rapuruttoloinen - monimuotoinen ja muuntaumiskykyinen taudinaiheuttaja. LUONNON TUTKIJA 120 1: 4-12. 2016
• Makkonen Jenny, Kokko Harri, Jussila Japo. 2016. Suomen jokiravuilla kapea perimä. SUOMEN KALASTUSLEHTI 123 4: 28-30. 2016
• Makkonen J, Vestarbacka A, Martin F, Jussila J, Diéguez-Uribeondo J, Kortet R, Kokko H. 2016. Mitochondrial genomes and comparative genomics of Aphanomyces astaci and Aphanomyces invadans. Scientific Reports 6: 36089. 2016
• Jussila J, Tiitinen V, Edsman L, Kokko H, Fotedar R. 2016. Signal crayfish in Lake Saimaa could be maladapted to the local conditions due to Aphanomyces astaci infection: A seven year study. Freshwater Crayfish 22 1: 53-60. 2016
• Makkonen Jenny, Kokko Harri, Jussila Japo. 2015. Mitochondrial cytochrome oxidase I gene analysis indicates a restricted genetic background in Finnish noble crayfish (Astacus astacus) stocks. Knowledge and Management of Aquatic Ecosystems 416: -. 2015
• Kostamo K, Toljamo A, Palonen P, Valkonen JPT, Kärenlampi SO, Kokko H. 2015. Control of downy mildew (Peronospora sparsa) in arctic bramble (Rubus arcticus ssp. arcticus). Annals of Applied Biology 167 1: 90-101. 2015
• Jussila Japo, Vrezec Al, Makkonen Jenny, Kortet Raine, Kokko Harri. 2015. Invasive Crayfish and Their Invasive Diseases in Europe with the Focus on the Virulence Evolution of the Crayfish Plague. In: Canning-Clode João (ed.) Biological Invasions in Changing Ecosystems: Vectors, Ecological Impacts, Management and Predictions. DE GRUYTER. s. 183-211. 2015
• Jussila J, Ruokonen T, Syväranta J, Kokko H, Vainikka A, Makkonen J, Kortet R. 2015. It takes time to see the menu from the body: an experiment on stable isotope composition in freshwater crayfishes. Knowledge and Management of Aquatic Ecosystems 416: 14 p. 2015
• Edsman Lennart, Nyström Per, Sandström Alfred, Stenberg Marika, Kokko Harri, Tiitinen Vesa, Makkonen Jenny, Jussila Japo. 2015. Eroded swimmeret syndrome in female crayfish Pacifastacus leniusculus associated with Aphanomyces astaci and Fusarium spp. infections. DISEASES OF AQUATIC ORGANISMS 112 3: 219-228. 2015
• Jussila Japo, Maguire Ivana, Kokko Harri, Makkonen Jenny. 2015. Chaos and Adaptation in the Pathogen-Host Relationship in Relation to the Conservation. The Case of the Crayfish Plague and the Noble Crayfish. In: Kawai Tadashi, Faulkes Zen, Scholtz Gerhard (ed.) Freshwater Crayfish A Global Overview. CRC PRESS. s. 246-274. 2015
• Jussila J, Makkonen J, Kokko H, Edsman L, Mäkinen P. 2015. Täplärapukanta voi romahtaa. SUOMEN KALASTUSLEHTI 122 6: 24-25. 2015
• Jussila J, Mannonen A, Jormanainen J, Nyström P, Sandström A, Stenberg M, Kokko H, Tiitinen V, Makkonen J, Edsman L. 2015. Rapujen sairaudet. In: Jormanainen J (ed.) Suomalainen rapukirja. Metsäkustannus. s. 48-57. 2015
• Jussila J, Makkonen J, Kokko H, Mäkinen P. 2014. Numerous Population Crashes of Wild Signal Crayfish (Pacifastacus leniusculus) in Southern Finland. Freshwater Crayfish 20 1: 73-79. 2014
• Mattila Hans, Kokko Harri. 2014. Mansikan puna- ja tyvimädän torjuntakeinot ja herkän tunnistusmenetelmän kehittäminen. KASVINSUOJELULEHTI 4: 108-111. 2014
• Jussila J, Toljamo A, Makkonen J, Kukkonen H, Kokko H. 2014. Practical disinfection chemicals for fishing and crayfishing gear against crayfish plague transfer. Knowledge and Management of Aquatic Ecosystems 413: 02. 2014
• Jussila Japo, Makkonen Jenny, Vainikka Anssi, Kortet Raine, Kokko Harri. 2014. Crayfish plague dilemma: how to be a courteous killer?. BOREAL ENVIRONMENT RESEARCH 19: 235-244. 2014
• Jussila J, Kokko H, Makkonen J, Nyström P, Sandström P, Stenberg M, Edsman L, Tiitinen V. 2014. Pyrstöjalkatauti täpläravun riesana. SUOMEN KALASTUSLEHTI 121 7: 24-25. 2014
• Jussila J, Kokko H, Kukkonen H, Makkonen J, Aydin H. 2014. Även signalkräfot dör i kräftpest. Fiskeritidskrift för Finland 58 3: 14-15. 2014
• Jussila J, Kokko H, Kukkonen H, Makkonen J, Aydin H. 2014. Täplärapukin kuolee rapuruttoon. SUOMEN KALASTUSLEHTI 121 5: 22-23. 2014
• Gruber Christina, Kortet Raine, Vainikka Anssi, Jussila Japo, Makkonen Jenny, Kokko Harri, Hirvonen Heikki. 2014. Variation in resistance to the invasive crayfish plague and immune defence in the native noble crayfish. ANNALES ZOOLOGICI FENNICI 51 preprint online since 12 May 2014: 371-381. 2014
• Aydin H, Kokko H, Makkonen J, Kortet R, Kukkonen H, Jussila J. 2014. The signal crayfish is vulnerable to both the As and the PsI-isolates of the crayfish plague. Knowledge and Management of Aquatic Ecosystems 413: 03. 2014
• Kokko H. 2013. The selection and domestication of wild berries ¿ current status of arctic bramble (Rubus arcticus), INTERNATIONAL CONFERENCE: NON-WOOD FOREST PRODUCTS, HEALTH AND WELL-BEING, 12th-13th of November 2013, Hotel Korpilampi, Espoo, Finland. ?. 2013
• Makkonen J, Kokko H, Vainikka A, Kortet R, Jussila J. 2013. Suomalaisten jokirapukantojen monimuotoisuus, XI Valtakunnalliset Rapupäivät, 13.11.2013, Kuopio, Finland. 1. 2013
• Makkonen J, Kokko H, Vainikka A, Kortet R, Jussila J. 2013. Dose-dependent mortality of the noble crayfish (Astacus astacus) to different strains of the crayfish plague (Aphanomyces astaci). JOURNAL OF INVERTEBRATE PATHOLOGY 115: 86-91. 2013
• Makkonen J, Kokko H, Vainikka A, Kortet R, Jussila J. 2013. Crayfish plague pathogen Aphanomyces astaci - Genetic diversity and adaptation to the host species, European Association of Fish Pathologists, 16th International Conference, 2.-6.9.2013, Tampere, Finland. Abstract book. p. 73. 2013
• Makkonen J, Kokko H, Kortet R, Vainikka A, Jussila J. 2013. Crayfish plague pathogen Aphanomyces astaci - Genetic diversity and adaptation to the host species, Regional European Crayfish Meeting CrayCro, 26.-28.9.2013, Rovinj, Croatia. Abstract book. p. 24. 2013
• Makkonen J, Jussila J, Koistinen L, Paaver T, Hurt M, Kokko H. 2013. Fusarium avenaceum causes burn spot disease syndrome in noble crayfish (Astacus astacus). JOURNAL OF INVERTEBRATE PATHOLOGY 113 1: 184-190. 2013
• Kostamo K, Toljamo A, Antonius K, Kokko H, Kärenlampi SO. 2013. Morphological and molecular identification to secure cultivar maintenance and management of self-sterile Rubus arcticus. ANNALS OF BOTANY 111: 713-721. 2013
• Jussila J, Tiitinen V, Fotedar R, Kokko H. 2013. A simple and efficient cooling method for post-harvest transport of the commercial crayfish catch. Freshwater Crayfish 19 1: 15-19. 2013
• Kokko H, Vetrerbacka A, Blande D, Makkonen J, Kortet R, Vainikka A, Jussila j. 2013. Aphanomyces astaci isolates express several RxLR effector genes, Regional European Crayfish Meeting CrayCro, 26.-28.9.2013, Rovinj, Croatia. Abstract book. 20. 2013
• Kokko H, Makkonen J, Blande D, Vainikka A, Kortet R, Vesterbacka A, Granlund L, Jussila J. 2013. Rapid influx and numerous epidemics of Aphanomyces astaci strains are altering the European crayfish distribution and biodiversity, Oomycete Molecular Genetics Network Meeting, Mach 10-12, 2013, Asilomar, CA, USA. 18. 2013
• Jussila J, Makkonen J, Toljamo A, Kokko H. 2013. Practical disinfectants against crayfish plague spores, Regional European Crayfish Meeting CrayCro, 26.-28.9.2013, Rovinj, Croatia. Abstract book. 19. 2013
• Gross R, Palm S, Koiv K, Prestegaard T, Jussila J, Paaver T, Geist J, Kokko H, Karjalainen A, Edsman L. 2013. Microsatellite markers reveal clear geographic structuring among threatened noble crayfish (Astacus astacus) populations in Northern and Central Europe. CONSERVATION GENETICS 14 4: 809-821. 2013
• Aydin H, Kokko H, Makkonen J, Jussila J. 2013. Signal crayfish are susceptible to crayfish plague infection under physiological challenge, Regional European Crayfish Meeting CrayCro, 26.-28.9.2013, Rovinj, Croatia. Abstract book. 1. 2013
• Aydin H, Jussila J, Kokko H, Tiitinen V. 2013. Rapulaatikko - rei'illä vai ilman?. SUOMEN KALASTUSLEHTI 120 6: 28-30. 2013
• Jussila J, Kokko H, Kortet R, Makkonen J. 2013. Aphanomyces astaci PsI-genotype isolates from different Finnish signal crayfish stocks show variation in their virulence but still kill fast. Knowledge and Management of Aquatic Ecosystems 411: 10. 2013
• Makkonen J, Jussila J, Kortet R, Vainikka A, Kokko H. 2012. Differing virulence of Aphanomyces astaci isolates and elevated resistance of noble crayfish Astacus astacus against crayfish plague. DISEASES OF AQUATIC ORGANISMS 102: 129-136. 2012
• Tommila T, Mäkelä T, Palonen P, Junttila O, Kokko H, Hytönen T. 2012. Mesimarja soveltuu katettuun tuotantoon. PUUTARHA & KAUPPA 9: 12. 2012
• Strand DA, Jussila J, Viljamaa-Dirks S, Kokko H, Makkonen J, Holst-Jensen A, Viljugrein H, Vrålstad T. 2012. Monitoring the spore dynamics of Aphanomyces astaci in the ambient water of latent carrier crayfish. VETERINARY MICROBIOLOGY 160 1-2: 99-107. 2012
• Makkonen J, Strand DA, Kokko H, Vrålstad T, Jussila J. 2012. Timing and quantifying Aphanomyces astaci sporulation from the noble crayfish suffering from the crayfish plague. VETERINARY MICROBIOLOGY Vol 162, Issues 2-4, 23 March 2013, Pages 750-755. 2012
• Makkonen J, Kokko H, Vainikka A, Kortet R, Jussila J. 2012. Jokiravun ja rapuruton suhde -väitöskirjatyön tuloksia, X Valtakunnalliset Rapupäivät. 1. 2012
• Makkonen J, Kokko H, Vainikka A, Kortet R, Jussila J. 2012. Differences in the virulence of crayfish plague (Aphanomyces astaci) strains confirmed with infection trials, Oral presentation in IAA, 19th International Symposium, August 26-31, 2012, Innsbruck, Austria. Abstract book. 36. 2012
• Li Tao, Holopainen Jarmo, Kokko Harri, Tervahauta Arja, Blande James. 2012. Herbivore-induced aspen volatiles temporally regulate two different indirect defences in neighbouring plants. FUNCTIONAL ECOLOGY 26 5: 1176-1185. 2012
• Makkonen J, Jussila J, Kokko H. 2012. The diversity of the pathogenic Oomycete (Aphanomyces astaci) chitinase genes within the genotypes indicate adaptation to its hosts. Fungal Genetics and Biology 49: 635-642. 2012
• Jussila, J., Makkonen, J., Kortet, R., Vainikka, A., Kokko, H.. 2012. To be or not to be a pathogen: co-evolution of crayfish plague (Aphanomyces astaci) and its native European crayfish hosts. In: (ed.) , The Crustacean Society summer meeting 2012, Athens, Conference program. ss. 8. 2012
• Hytönen T, Palonen P, Valkonen J, Laine A-L, Elomaa P, Kärenlampi S, Kokko H, Kostamo K, Karhu S, Koivisto A, Tuovinen T, Uosukainen M.. 2012. Uudessa marjahankkeessa kehitetään tunnelituotantoa. PUUTARHA & KAUPPA 23: 32. 2012
• Kokko Harri, Toljamo Anna, Kostamo Katri, Kärenlampi Sirpa. 2012. Uutta viljelytekniikkaa mesimarjalle. PUUTARHA & KAUPPA 5: 32. 2012
• Jussila, J., Makkonen, J., Kortet, R., Vainikka, A., Kokko, H.. 2012. To be or not to be a pathogen: co-evolution of crayfish plague (Aphanomyces astaci) and its native European crayfish hosts. In: (ed.) , Towards a responsible future in inland fisheries. EIFAAAC 2012 symposium. ss. 50. 2012
• Kokko H, Koistinen L, Harlioglu M, Makkonen J, Aydin H, Jussila J. 2012. Recovering Turkish narrow clawed crayfish (Astacus leptodactylus) populations carry Aphanomyces astaci Knowledge and Management of Aquatic Ecosystems 404: 12: 1-7. 2012
• Alaranta, A., Jussila, J., Kokko, H.. 2011. Inheritance of ITS1 region microsatellite-like repeats in the noble crayfish, Astacus astacus (Decapoda, Astacidea) Crustaceana 84 11: 1325-1336. 2011
• Jussila, J., Makkonen, J., Kokko, H.. 2011. Peracetic acid (PAA) treatment is an effective disinfectant against crayfish plague (Aphanomyces astaci) spores in aquaculture AQUACULTURE 320 1-2: 37-42. 2011
• Jussila, J., Makkonen, J., Vainikka, A., Kortet, R., Kokko, H.. 2011. Latent crayfish plague (Aphanomyces astaci) infection in a robust wild noble crayfish (Astacus astacus) population AQUACULTURE 321 1-2: 17-20. 2011
• KOKKO H, MAKKONEN J, VAINIKKA A, KORTET R, JUSSILA J. 2011. Host-pathogen interactions: the search of oomycete effectors by next generation sequencing of transcriptomes. In: (ed.) , Coevolution symposium Jyväskylä 4-7 October 2011. ss. 17. 2011
• Kokko Harri, Nissinen Mikko. 2011. Omenaruven torjuntaan kestävin lajikkein PUUTARHA & KAUPPA 11: 16. 2011
• Kokko Harri. 2011. Crayfish plague diversity. In: (ed.) , Teoksessa: (toim.), IX National Crayfish Seminar, Helsinki, 16.11.2011. CraySeminar Abstracts.. ss. 2-3. 2011
• Makkonen J, Jussila J, Henttonen P, Kokko H. 2011. High diversity of A. astaci chitinase genes after the host jumps, Co-Evolution Symposium, 6.10.2011, Jyväskylä, Finland. Abstract book. 12. 2011
• Makkonen, J., Jussila, J., Henttonen, P., Kokko, H.. 2011. Genetic variation in the ribosomal internal transcribed spacers of Aphanomyces astaci Schikora from Finland. AQUACULTURE 311 1-4: 48,53. 2011
• Makkonen, J., Kokko, H., Henttonen, P., Kivistik, M., Hurt, M., Paaver, T., Jussila, J.. 2010. Several fungi isolated from Saaremaa (Estonia) noble crayfish (Astacus astacus) with melanised spots. Freshwater Crayfish 17: 155-158. 2010
• Makkonen, J., Kokko, H., Henttonen, P., Jussila, J.. 2010. Crayfish plague (Aphanomyces astaci) is vertically transferred during artificial incubation of crayfish eggs ¿ preliminary results Freshwater Crayfish 17: 151-154. 2010
• Jussila, J., Kortet, R., Kokko, H., Henttonen, P., Makkonen, J., Vainikka, A.. 2010. Raputaudit haasteena. SUOMEN KALASTUSLEHTI 6: 16-19. 2010
• Hanhineva K, Soininen P, Anttonen MJ, Kokko H, Rogachev I, Aharoni A, Laatikainen R, Kärenlampi S. 2009. NMR and UPLC-qTOF-MS/MS characterisation of novel phenylethanol derivates of phenylpropanoid glucosides from the leaves of strawberry (Fragaria x ananassa cv. Jonsok). PHYTOCHEMICAL ANALYSIS 20: 353-364. 2009
• Hanhineva K, Kokko H, Siljanen H, Rogachev I, Aharoni A & Kärenlampi SO. 2009. Stilbene synthase gene transfer caused alterations in the phenylpropanoid metabolism of transgenic strawberry (Fragaria x ananassa). JOURNAL OF EXPERIMENTAL BOTANY 60 7: 2093-2106. 2009
• Hanhineva K, Soininen P, Anttonen MJ, Kokko H, Rogachev I, Aharoni A, Laatikainen R & Kärenlampi S. 2009. NMR and UPLC-qTOF-MS/MS characterisation of novel phenylethanol derivatives of phenylpropanoid glucosides from the leaves of strawberry (Fragaria x ananassa cv. Jonsok). PHYTOCHEMICAL ANALYSIS 20: 353-364. 2009
• Hanhineva K, Anttonen MJ, Kokko H, Soininen P, Laatikainen R, Kärenlampi S, Rogachev I, Aharoni A. 2009. Stilbene synthase gene transfer resulted in down regulation of endogenous chalcone synthase in strawberry (Fragaria x ananassa) and led to the identification of novel phenylpropanoid glucosides: Hanke M-V, Dunemann F, Flachowsky H, Proceedings of the First International Symposium on Biotechnology of Fruit Species Bioftechfruit 2008.International Society for Horticultural Science . Acta Horticulturae. 673-679. 2009
• Hanhineva K, Rogachev I, Kokko H, Mintz-Oron S, Venger I, Kärenlampi S, Aharoni A. 2008. Non-targeted analysis of spatial metabolite composition in strawberry (Fragaria x ananassa) flowers PHYTOCHEMISTRY 69: 2463-2481. 2008
• Hukkanen A, Kokko H, Buchala A, Häyrinen J, Kärenlampi S. 2008. Benzothiadiazole affects the leaf proteome in arctic bramble (Rubus arcticus). MOLECULAR PLANT PATHOLOGY 9 6: 799-808. 2008
• Hukkanen A, Kostamo K, Kärenlampi S, Kokko H. 2008. Impact of agrochemicals on Peronospora sparsa and phenolic profiles in three Rubus arcticus cultivars. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 56: 1008-1016. 2008
• Kärenlampi L, Silvennoinen S, Kokko H, Kärenlampi S. 2008. Kuopion yliopiston tutkimuspuutarha: Väre H, Koponen A, Hämet-Ahti L, Hagman M, Raisio J, Puiden jäljillä. 400 vuotta dendrologian historiaa.Dendrologian Seura - Dendrologiska Sällskapet r.y.. Publications of the Finnish Dendrological Society. 188-190. 2008
• Hanhineva K, Kokko H, Kärenlampi S. 2007. Generation of genetically modified strawberries in temporary immersion bioreactor system: Xu Z, Li J, Xue Y, Yang W, Biotechnology and Sustainable Agriculture 2006 and Beyond. Proceedings of the 11th IAPTC&B Congress.Springer. 115-118. 2007
• Hukkanen A, Kokko H, Kostamo K, Kärenlampi S. 2007. Mesimarjan viljelyssä tarvitaan tutkimus- ja koetoimintaa PUUTARHA & KAUPPA 5: 5. 2007
• Hukkanen AT, Kokko HI, Buchala AJ, McDougall GJ, Stewart D, Kärenlampi SO, Karjalainen RO. 2007. Benzothiadiazole induces the accumulation of phenolics and improves resistance to powdery mildew in strawberries. JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 55: 1862-1870. 2007
• Alaranta A, Henttonen P, Jussila J, Kokko H, Prestegaard T, Edsman L, Halmekytö M. 2006. Genetic differences among noble crayfish (Astacus astacus) stocks in Finland, Sweden and Estonia based on the ITS1 region. BULLETIN FRANCAIS DE LA PECHE ET DE LA PISCICULTURE 380-381: 965-976. 2006
• Hukkanen A, Pietikäinen L, Kärenlampi S, Kokko H. 2006. Quantification of downy mildew (Peronospora sparsa) in Rubus species using real-time PCR. EUROPEAN JOURNAL OF PLANT PATHOLOGY 116: 225-235. 2006
• Hukkanen AT, Pölönen SS, Kärenlampi SO, Kokko HI. 2006. Antioxidant capacity and phenolic content of sweet rowanberries JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 54: 112-119. 2006
• Lehesranta SJ, Davies HV, Shepherd LVT, Nunan N, McNicol JW, Auriola S, Koistinen KM, Suomalainen S, Kokko HI, Kärenlampi SO. 2005. Comparison of tuber proteomes of potato varieties, landraces, and genetically modified lines PLANT PHYSIOLOGY 138: 1690-1699. 2005
• Mylnikov SV, Kokko HI, Kärenlampi SO, Oparina TI, Davies HV, Stewart D. 2005. Rubus fruit juices affect lipid peroxidation in a Drosophila melanogaster model in vivo JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 53: 7728-7733. 2005
• Hanhineva K, Kokko H, Kärenlampi S. 2005. Shoot regeneration from leaf explants of five strawberry (Fragaria x ananassa) cultivars in temporary immersion bioreactor system. IN VITRO CELLULAR AND DEVELOPMENT BIOLOGY - PLANT 41 6: 826-831. 2005
• Kokko H, Toivonen K,Hukkanen A, Laitinen M-L, Kärenlampi S. 2005. Marjat - pohjolan kultaa, Berries - gold of north. 2005
• Cuypers A, Koistinen KM, Kokko H, Kärenlampi S, Auriola S, Vangronsveld J. 2005. Analysis of bean (Phaseolus vulgaris L.) proteins affected by copper stress JOURNAL OF PLANT PHYSIOLOGY 162: 383-392. 2005
• Kokko H, Teittinen H, Kärenlampi S. 2004. Revegetation of peatland for cloudberry cultivation. In: Päivänen J (ed.) , Wise Use of Peatlands. Proceedings of the12th International Peat Congress.International Peat Society. ss. 379-382. 2004
• Hukkanen A, Anttonen M, Kokko H, Kärenlampi S, Karjalainen R. 2003. Variation in flavonol content among berry cultivars grown under Northern conditions. In: Hicklenton P, Maas J (ed.) , XXVI International Horticultural Congress: Berry Crop Breeding, Production and Utilization for a New Century. Acta Horticulturae. ss. 45-50. 2003
• Karjalainen R, Hukkanen A, Anttonen M, Tiilikkala K, Kokko H, Kärenlampi S. 2002. Heräteaineet ja fenoliyhdisteet kasvitautien torjunnassa: Tiilikkala K, Biotorjunta osana ekologista kasvinsuojelua.MTT. Maa- ja elintarviketalous. 78. 2002
• Koistinen KM, Hassinen VH, Gynther PAM, Lehesranta SJ, Keinänen SI, Kokko HI, Oksanen EJ, Tervahauta AI, Auriola S, Kärenlampi SO. 2002. Birch PR-10c is induced by factors causing oxidative stress but appears not to confer tolerance to these agents. NEW PHYTOLOGIST 155: 381-391. 2002
• Koistinen KM, Kokko HI, Hassinen VH, Tervahauta AI, Auriola S, Kärenlampi SO. 2002. Stress-related RNase PR-10c is post-translationally modified by glutathione in birch. PLANT, CELL AND ENVIRONMENT 25: 707-715. 2002
• Mikkonen TP, Hukkanen AT, Määttä KR, Kokko HI, Törrönen AR, Kärenlampi SO, Karjalainen RO. 2002. Flavonoid content in strawberry cultivars: Hietaranta T, Linna M-M, Palonen P, Parikka P, Proceedings of the Fourth International Strawberry Symposium.ISHS. Acta Horticulturae. 815-818. 2002
• Mikkonen TP, Määttä KR, Hukkanen AT, Kokko HI, Törrönen AR, Kärenlampi SO, Karjalainen RO. 2001. Flavonol content varies among black currant cultivars JOURNAL OF AGRICULTURAL AND FOOD CHEMISTRY 49: 3274-3277. 2001
• Oksanen E, Amores G, Kokko H, Santamaria JM, Kärenlampi L. 2001. Genotypic variation in growth and physiological responses of Finnish hybrid aspen (Populus tremuloides x P. tremula) to elevated tropospheric ozone concentration. TREE PHYSIOLOGY 21: 1171-1181. 2001
• Jones AT, McGavin WJ, Mayo MA, Angel-Diaz JE, Kärenlampi SO, Kokko H. 2000. Comparisons of some properties of two laboratory variants of Raspberry bushy dwarf virus (RBDV) with those of three previously characterised RBDV isolates. EUROPEAN JOURNAL OF PLANT PATHOLOGY 106: 623-632. 2000
• Riekki R, Palomäki T, Virtaharju O, Kokko H, Romantschuk M, Saarilahti HT. 2000. Members of the amylovora group of Erwinia are cellulolytic and possess genes homologous to the type II secretion pathway. MOLECULAR GENETICS AND GENOMICS 263: 1031-1037. 2000
• Certal AC, Sanchez AM, Kokko H, Broothaerts W, Oliveira MM, Feijo JA. 1999. S-RNases in apple are expressed in the pistil along the pollen tube growth path. SEXUAL PLANT REPRODUCTION 12: 94-98. 1999
• Kokko H, Virtaharju O, Kärenlampi S, Cooke DEL, Williams NA, Williamson B. 1999. Downy mildew (Peronospora rubi) in Rubus arcticus: a threat to commercial berry production in Finland: McGregor GR, Hall HK, Langford GI, Proceedings of the Seventh International Rubus Ribes Symposium.International Society for Horticultural Science. Acta Horticulturae. 137-141. 1999
• Pääkkönen E, Seppänen S, Holopainen T, Kokko H, Kärenlampi S, Kärenlampi L, Kangasjärvi J. 1998. Induction of genes for the stress proteins PR-10 and PAL in relation to growth, visible injuries and stomatal conductance in birch (Betula pendula) clones exposed to ozone and/or drought. NEW PHYTOLOGIST 138: 295-305. 1998
• Utriainen M, Kokko H, Auriola S, Sarrazin O, Kärenlampi S. 1998. PR-10 protein is induced by copper stress in roots and leaves of a Cu/Zn tolerant clone of birch, Betula pendula. PLANT, CELL AND ENVIRONMENT 21: 821-828. 1998
• Kokko H, Kärenlampi S, Hämäläinen J, Holopainen J. 1998. Lehtihome ja peltolude mesimarjan kuivumisongelman aiheuttajina PUUTARHA & KAUPPA 39: 4-5. 1998
• Kokko HI, Kärenlampi SO. 1998. Update to: Identification of RNA virus isolates after IC-RT-PCR by direct sequencing using biotinylated and M13 universal tailed primers: Siebert P, The PCR Technique: RT-PCR.BioTechniques Books (Eaton Publishing). 217-219. 1998
• Kokko HI, Kärenlampi SO. 1998. Transformation of arctic bramble (Rubus arcticus L.) by Agrobacterium tumefaciens. PLANT CELL REPORTS 17: 822-826. 1998
• Kokko H, Kuronen I, Kärenlampi S. 1998. Rapid production of antibodies in chicken and isolation from eggs. In: Celis JE (ed.) , Cell Biology. A Laboratory Handbook. 2nd ed..Academic Press. ss. 410-417. 1998
• Kuronen I, Kokko H, Mononen I, Parviainen M. 1997. Hen egg yolk antibodies purified by Antigen affinity under highly alkaline conditions provide new tools for diagnostics,human intact paratyrin as a model antigen. CLINICAL CHEMISTRY AND LABORATORY MEDICINE 35 6: 435-440. 1997
• Kokko H, Lemmetty A, Haimi P, Kärenlampi S. 1996. New host for raspberry bushy dwarf virus: arctic bramble (Rubus arcticus). EUROPEAN JOURNAL OF PLANT PATHOLOGY 102: 713-717. 1996
• Kokko HI, Kivineva M, Kärenlampi SO. 1996. Single-step immunocapture RT-PCR in the detection of raspberry bushy dwarf virus. BIOTECHNIQUES 20 5: 842-846. 1996
• Häkkinen S, Kokko H, Kärenlampi S. 1995. Sugars and organic acids in clones and cultivars of arctic bramble and hybrid. Sensory evaluation of juices and jellies. AGRICULTURAL AND FOOD SCIENCE IN FINLAND 4: 385-395. 1995
• Kärenlampi L, Anttonen S, Holopainen T, Holopainen J, Kainulainen P, Kangasjärvi J, Kokko H, Kärenlampi S, Palomäki V, Pellinen R, Pääkkönen E, Rantanen L, Tarhanen S, Tuomainen J, Wulff A. 1995. Forest-related ozone studies in the University of Kuopio. Challenges at molecular, physiological and ecological level. ILMANSUOJELU-LEHTI 3: 12-18. 1995
• Kärenlampi S, Häkkinen S, Kokko H. 1995. Kuopion yliopiston puutarhatutkimus. PUUTARHA 98 8: 446-449. 1995
• Parviainen M, Kuronen I, Kokko H, Lakaniemi M, Savolainen K, Mononen I. 1994. Two-site enzyme immunoassay for measuring intact human ostecalcin in serum. JOURNAL OF BONE AND MINERAL RESEARCH 9: 347-354. 1994
• Kuronen I, Kokko H, Parviainen M. 1993. Production of monoclonal and polyclonal antibodies against human osteocalcin sequences and development of a two-site ELISA for intact human osteocalcin. JOURNAL OF IMMUNOLOGICAL METHODS 163: 233-240. 1993
• Kauppinen RA, Kokko H, Williams SR. 1992. Detection of mobile proteins by proton nuclear magnetic resonance spectroscopy in the guinea pig brain ex vivo and their partial purification. JOURNAL OF NEUROCHEMISTRY 58: 967-974. 1992
• Kauppinen RA, Nissinen T, Kärkkäinen AM, Pirttilä TRM, Palvimo J, Kokko H, Williams SR. 1992. Detection of thymosin beta-4 in Situ in a guinea pig cerebral cortex preparation using 1H NMR spectroscopy. JOURNAL OF BIOLOGICAL CHEMISTRY 267: 9905-9910. 1992
• Kokko H, Kärenlampi S. 1992. Antibody from hen's eggs against a concerved sequence of the gametophytic self-incompatibility proteins of plants ANALYTICAL BIOCHEMISTRY 201: 311-318. 1992