Piia Bartos
Senior Researcher
Computer-aided drug design with simulations of small noncoding-RNA molecules and understanding th...
School of Pharmacy, Faculty of Health Sciences
I am a pharmaceutical chemist with my research interests now in short non-coding RNA sequences and how to mimic their function using synthetic drugs. My background is in Pharmacy, and I defended my Doctoral thesis in drug design of sirtuins in autumn 2015 in UEF. After my dissertation, I left to study molecular dynamics methods and enzyme engineering to Brno, Czech Republic. I can use all the basic tools of computational drug design, including docking and molecular dynamics simulations and up to some simple quantum chemistry calculations.
Research groups
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Publications
12/12 items-
Lääkkeen vaikutuskohteen tietokonemalleista apua yksilöidyn syöpälääkkeen valintaan
Bartos, Piia; Kuittinen, Outi; Poso, Antti, 2024, Duodecim, 140, 20, 1703-1709. A2 Review article, Literature review, Systematic review -
Solid-State NMR Validation of OPLS4: Structure of PC-Lipid Bilayers and Its Modulation by Dehydration
Kurki, Milla; Nesterenko, Alexey M; Alsaker, Nicolai E; M Ferreira, Tiago; Kyllönen, Sami; Poso, Antti; Bartos, Piia; Miettinen, Markus S, 2024, Journal of physical chemistry b, 128, 50, 12483-12492. A1 Journal article (refereed), original research -
Targeting ocular tissues with intravenously administered aptamers selected by in vivo SELEX
Korhonen, Sonja; Stenberg, Katja; Seemab, Umair; Bartos, Piia; Mäkiniemi, Katariina; Kjems, Jørgen; Dupont, Daniel Miotto; Subrizi, Astrid, 2024, Molecular therapy nucleic acids, 35, 4, 102352. A1 Journal article (refereed), original research -
Direct pathway cloning and expression of the radiosumin biosynthetic gene cluster
Ouyang, Xiaodan; D'Agostino, Paul M; Wahlsten, Matti; Delbaje, Endrews; Jokela, Jouni; Permi, Perttu; Gaiani, Greta; Poso, Antti; Bartos, Piia; Gulder, Tobias AM; Koistinen, Hannu; Fewer, David P, 2023, Organic and biomolecular chemistry, 21, 23, 4893-4908. A1 Journal article (refereed), original research -
RNA-protein complexes and force field polarizability
Baltrukevich, Hanna; Bartos, Piia, 2023, Frontiers in chemistry, 11, 1217506. A1 Journal article (refereed), original research -
Structure of POPC Lipid Bilayers in OPLS3e Force Field
Kurki, Milla; Poso, Antti; Bartos, Piia; Miettinen, Markus S, 2022, Journal of chemical information and modeling, 62, 24, 6462–6474. A1 Journal article (refereed), original research -
Transcription and Translation Inhibitors in Cancer Treatment
Laham-Karam, Nihay; Pinto, Gaspar; Poso, Antti; Kokkonen, Piia, 2020, Frontiers in chemistry, 8, 276. A2 Review article, Literature review, Systematic review -
Studying sirtuin inhibitors with in silico and in vitro approaches
Kokkonen Piia, 2015, Publications of the University of Eastern Finland. Dissertations in Health Sciences. G5 Doctoral dissertation (article) -
Virtual screening approach of sirtuin inhibitors results in two new scaffolds
Kokkonen Piia, Kokkola Tarja, Suuronen Tiina, Poso Antti, Jarho Elina, Lahtela-Kakkonen Maija, 2015, European journal of pharmaceutical sciences, 76, 27-32. A1 Journal article (refereed), original research -
Quantitative insights for the design of substrate-based SIRT1 inhibitors
Kokkonen Piia, Mellini Paolo, Nyrhilä Olli, Rahnasto-Rilla Minna, Suuronen Tiina, Kiviranta Päivi, Huhtiniemi Tero, Poso Antti, Jarho Elina, Lahtela-Kakkonen Maija, 2014, European journal of pharmaceutical sciences, 59, 12-19. A1 Journal article (refereed), original research
