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Human Brain Disease Modelling (Lehtonen lab) profiilikuva

Human Brain Disease Modelling (Lehtonen lab)

Tutkimusryhmä
01.01.2021 -
A.I. Virtanen -instituutti, Terveystieteiden tiedekunta
Tiedot Ihmiset Julkaisut

Johtajat

Group overview

We develop physiologically relevant human-based models to study the cellular and molecular mechanisms underlying neurological diseases and to predict drug transport into the brain. By using patient-derived cells in 2D and 3D culture systems, such as organoids and microfluidic chips, we aim to mimic pathological conditions in the diseased brain. Our methodology combines approaches like single-cell and spatial transcriptomics, proteomics, electrophysiology, and imaging technologies to reveal novel therapeutic targets and improve early disease detection. We provide a collaborative multidisciplinary research environment that includes basic and clinical researchers, bioinformaticians, and computational biologists. We tightly collaborate with clinical experts Henna-Kaisa Jyrkkänen (KYS), Filip Scheperjans (HUS), and Liisa Myllykangas at the University of Helsinki.

Ajankohtaista

Projektit

Yhteistyö

  • Šárka Lehtonen, Ph.D. in Pharmacology – I am a highly motivated, results-driven senior researcher and group leader with over 20 years of experience in in vitro and in vivo pharmacology and over 10 years in stem cell technology. I am very committed to exceeding goals and working with the team to develop novel human models for neurological diseases and drug development studies.

    Katrina Räty (Albert), Ph.D. in Pharmacology – I have expertise in models of Parkinson’s disease, with a focus on the main pathological protein: alpha-synuclein. I completed my PhD at the University of Helsinki and then went to the University of Cambridge to improve my knowledge of alpha-synuclein. Now that I am back in Finland, I am starting my own project in the Lehtonen lab, focusing on microglia and alpha-synuclein. My main interest is in making better preclinical models to find new treatments for disease. When I’m not thinking about alpha-synuclein you can find me trying new beers and brewing my own, or then attending concerts (just kidding – I’m thinking about alpha-synuclein those times too).

    Sinem Yildirim (Guden), Ph.D. in Pharmacology – I am particularly interested in neuroinflammation and neurodegeneration. In my current position as a postdoctoral researcher in the Lehtonen lab, I have been working on a project investigating how environmental micro- and nanoplastics affect the immune response in Parkinson’s disease. I seek to enhance my expertise in developing translatable, predictive human cellular models to address the urgent need for effective pharmaceuticals for neurodegenerative diseases.

    Stefanie Klima, Ph.D. in Biological Sciences – I have expertise in stem cell-based in vitro models for neuroscience and disease modelling, with a focus on developing human-relevant models to uncover how diseases develop and progress. I am particularly interested in understanding the underlying mechanisms driving pathological changes at the cellular and molecular levels. In my project in the Lehtonen lab, I combine multi-omics approaches and in vitro models to reveal pathways and mechanisms altered in Parkinson’s disease.

    Jonna Niskanen, M.Sc. in Molecular Medicine, PhD student – I am intrigued by our immune system – the body’s first line of defense – and the intercellular communications within. My previous projects have all been connected to cellular communications in one way or another. In my current position, I can combine cell signaling and immunology. I study iPSC-derived microglia and astrocytes in PD to see how these highly reactive glial cells affect neuronal wellbeing.

    Sara Kälvälä, M.Sc. in Biomedicine – My research is focused on iPSC-derived midbrain organoids as a model system for PD. Next-generation human-based disease models could offer a more efficient and physiologically relevant alternative to animal models, bridging the gap between in vivo and in vitro. The brain is an immensely intricate organ with a wide variety of cell types functioning in perfect harmony – capturing a snapshot of that complexity in vitro is super exciting!​​ I completed my Master’s thesis in the Lehtonen lab and am thrilled to continue working with the group. Outside the lab, I enjoy creative activities like drawing, photography, and sculpting. Also, a self-confessed podcast addict.

    Sanni Peltonen, M.Sc. in Biomedicine – I’m working on projects related to the blood-brain barrier and microglia. I graduated from the University of Eastern Finland at the beginning of 2022, but have been working in the group since 2021. Before that, I completed my master’s thesis in the group. Currently, I am concentrating on blood-brain barrier modelling and glial cells. For me, it is important to develop more accurate human in vitro models for disease research and drug development, thereby offering better alternatives to in vivo models.

    Valtteri Syvänen, M.Sc. in Pharmacy – I am currently working as a project researcher in the Human Brain Disease Modelling Group. When I finished my Master’s thesis in the Lehtonen lab, it was clear to me that I wanted to keep exploring the vast field of disease modelling. Neurodegenerative diseases have been a major focus of my studies, so it is exciting to continue this work as part of this group. I have experience in 3D and 2D culturing, and my current focus is on developing an in vitro gut-brain axis model to study gut changes in Parkinson’s disease.

  • 2022

    • Lab ”pikkujoulu” dinner at Kuzina
    • Valtteri Syvänen continues to work in our group as a project researcher from July
    • Katrina Räty received a grant from the YUFE Postdoctoral Programme
    • Eugenio Gallucio from Italy joined our group as an intern
    • Katrina Räty received the postdoctoral funding from the Finnish Cultural Foundation
    • Patryk Krupa from Poland joined our group as a research trainee to work with midbrain organoids
    • PhD student Tuuli-Maria Sonninen and PI Sarka Lehtonen received research grants from Päiviki and Sakari Sohlberg Foundation to model BBB with human iPSC-derived cells and to reveal metabolic profile of human microglia obtained from PD patients

  • Course description: Animal models are important in biomedical research, yet they do not fully recapitulate human development or diseases and can be expensive. Non-animal methods, often known as “in vitro” or “in silico”, aim to reduce and partly replace the use of animals in scientific experiments. Their use also promotes the 3R principles in research and has become increasingly important since the FDA no longer requires animal experiments prior to human drug trials and the European Union has issued a directive to end all laboratory experiments within the EU (Directive 2010/63/EU). The aim of the course is to give students a comprehensive overview of the different non-animal methods used in biomedical research, industry, and toxicology testing. The course will also showcase the latest technologies, including organ-on-chip, and findings from using alternative methods. Speakers from academia, industry, and regulatory bodies will discuss their work using alternative non-animal methods. The students will have the opportunity to present their scientific work and to meet the speaker for informal interactions. There will also be opportunities to visit local biomedical research companies to learn about their work on alternative methods in practice.

    Credit points: 1-2 (1 ECTS for attendance at lectures; 2 ECTS for attendance at lectures, and a written report, a short summary of 1-2 lectures written after the course or a poster or presentation).

    Course director: Šárka Lehtonen (UEF/AIVI), board member of Finnish 3R for replacement

    Course co-organizers: Johanna Englund (UH), Jenni Hakkarainen (Experimentica), Virve Sihvola (ECHA)

    Venue: Kuopio campus, Medistudia building, room MS301, Yliopistonrinne 3, Kuopio

    26.-27.8. 2024 (Medistudia, UEF, Kuopio)

    Registration: https://link.webropolsurveys.com/Participation/Public/921c26ec-eacb-4ab1-8de9-f8bab28382f9?displayId=Fin3129106 by August 8th, 2024

    DAY 1.

    12.30 – 13.00   Registration

    13.00 – 13.15   Welcome, practical matters and introduction of participants

    SESSION 1. Basic science session

    13.15 – 14.00   Plenary lecture TBI 

    14.00 – 14.40   Coffee, exhibition and a poster session

    14.40 – 15.10   Hanna Vuorenpää (Tampere University): In vitro models in replacing animal models -new era  of Organ-on-Chip technology

    15.10 – 15.40   Erdogan Pekcan Erkan (Tampere University): Imperfect, yet useful: modeling abdominal cancers with patient-derived tumor organoids

    15.40 – 16.10   Maria Hytti (UEF) TBI

    16.10 – 17.00   Meet the speakers

    DAY 2.

    SESSION 2. Regulatory bodies + Companies

    09.00 – 09.45   Plenary lecture Sirpa Pietikäinen (Member of EPPA)

    09.45 – 10.15     Elina Brusila (ECHA): Regulatory Application – Alternative methods to industrial chemicals

    10.15 – 10.45      Coffee, exhibition and a poster session

    10.45 – 11.15      Pauliina Lehtolainen-Dalkilic (FIMEA): Regulatory perspective update:  how EMA and National Agencies are advancing 3Rs

    11.15 – 11.45       Tony Kiuru (UPM): GrowDex – Animal-free option for automated 3D cell culture assays

    11.45 – 11.55      Students presentations

    11.55 – 12.05      Students presentations

    12.05 – 12.15      Students presentations

    12.15 – 13.00      Lunch and exhibition

    SESSION 3. Companies

    13.00 – 13.45.    Plenary lecture Melina Malinen (ORION): ”Advancing Drug Discovery: Harnessing Human-Based Alternatives”,

    13.45 – 13.55    Wrapping up the course

    13.55 – 14.15    Coffee and exhibition

    14.45 – 16:00   Visit to company 1 –Experimentica Ltd  2×30 min, 12+12 students

    14.45 – 16:00   Visit to company 2 –Ferring VENTURE Oy 2×30, 12+12 students

Avainsanat

astrocytes blood-brain barrier dopaminergic neurons endothelial cells humanised mouse models iPSC microfluidics microglia midbrain organoids neurons organ-on-chip Parkinsonin tauti pericytes psychopathy schizophrenia

Johtajat

Vanhemmat tutkijat

Tutkijatohtorit

Väitöskirjatutkijat

Julkaisut

85 kappaletta