Ali Abdollahzadeh
Academy Research Fellow
Academy Research Fellow
A.I. Virtanen Institute for Molecular Sciences, Faculty of Health Sciences
Publications
14/14 items-
Node of Ranvier remodeling in chronic psychosocial stress and anxiety
Koskinen, Maija-Kreetta; Laine, Mikaela; Abdollahzadeh, Ali; Gigliotta, Adrien; Mazzini, Giulia; Journée, Sarah; Alenius, Varpu; Trontti, Kalevi; Tohka, Jussi; Hyytiä, Petri; Sierra, Alejandra; Hovatta, Iiris. 2023. Neuropsychopharmacology. 48: 1532-1540 A1 Journal article (refereed), original research -
SproutAngio: an open-source bioimage informatics tool for quantitative analysis of sprouting angiogenesis and lumen space
Beter, M; Abdollahzadeh, A; Pulkkinen, HH; Huang, H; Orsenigo, F; Magnusson, PU; Ylä-Herttuala, S; Tohka, J; Laakkonen, JP. 2023. Scientific reports. 13: . 7279 A1 Journal article (refereed), original research -
The role of the meningeal lymphatic system in local meningeal inflammation and trigeminal nociception
Mikhailov, Nikita; Virenque, Anaïs; Koroleva, Kseniia; Eme-Scolan, Elisa; Teleman, Matei; Abdollahzadeh, Ali; Giniatullina, Raisa; Gafurov, Oleg; Krivoshein, Georgii; Malm, Tarja; Hämäläinen, Riikka H; Sierra, Alejandra; Tohka, Jussi; Rua, Rejane; Noe, Francesco M; Giniatullin, Rashid. 2022. Scientific reports. 12: . 8804 A1 Journal article (refereed), original research -
gACSON software for automated segmentation and morphology analyses of myelinated axons in 3D electron microscopy
Behanova, Andrea; Abdollahzadeh, Ali; Belevich, Ilya; Jokitalo, Eija; Sierra, Alejandra; Tohka, Jussi. 2022. Computer methods and programs in biomedicine. 220: A1 Journal article (refereed), original research -
Automated 3D segmentation and morphometry of white matter ultrastructures
Abdollahzadeh, Ali. 2021. Publications of the University of Eastern Finland. Dissertations in Health Sciences G5 Doctoral dissertation (article) -
Cylindrical Shape Decomposition for 3D Segmentation of Tubular Objects
Abdollahzadeh, Ali; Sierra, Alejandra; Tohka, Jussi. 2021. IEEE access. 9: 23979-23995 A1 Journal article (refereed), original research -
DeepACSON automated segmentation of white matter in 3D electron microscopy
Abdollahzadeh, Ali; Belevich, Ilya; Jokitalo, Eija; Sierra, Alejandra; Tohka, Jussi. 2021. Communications biology. 4: 179 A1 Journal article (refereed), original research -
Steerable3D: An ImageJ plugin for neurovascular enhancement in 3-D segmentation
Miocchi, Paolo; Sierra, Alejandra; Maugeri, Laura; Stefanutti, Eleonora; Abdollahzadeh, Ali; Mangini, Fabio; Moraschi, Marta; Bukreeva, Inna; Massimi, Lorenzo; Brun, Francesco; Tohka, Jussi; Gröhn, Olli; Mittone, Alberto; Bravin, Alberto; Nicaise, Charles; Giove, Federico; Cedola, Alessia; Fratini, Michela. 2021. Physica medica. 81: 197-209 A1 Journal article (refereed), original research -
Transfer Learning in Magnetic Resonance Brain Imaging: A Systematic Review
Valverde, Juan Miguel; Imani, Vandad; Abdollahzadeh, Ali; De Feo, Riccardo; Prakash, Mithilesh; Ciszek, Robert; Tohka, Jussi. 2021. Journal of imaging. 7: 66 A2 Review article, Literature review, Systematic review -
BV-2 Microglial Cells Overexpressing C9orf72 Hexanucleotide Repeat Expansion Produce DPR Proteins and Show Normal Functionality but No RNA Foci
Rostalski, Hannah; Hietanen, Tomi; Leskelä, Stina; Behánová, Andrea; Abdollahzadeh, Ali; Wittrahm, Rebekka; Mäkinen, Petra; Huber, Nadine; Hoffmann, Dorit; Solje, Eino; Remes, Anne M; Natunen, Teemu; Takalo, Mari; Tohka, Jussi; Hiltunen, Mikko; Haapasalo, Annakaisa. 2020. Frontiers in neurology. 11: 550140 A1 Journal article (refereed), original research