Jaakko Paasonen

Modeling the stress and forces on multi-channel TMS coil arrays in high-field MRI scanners

Koponen, Maria A; Korhonen, Juuso T; Membrilla, Jose A Vilchez; Sinisalo, Heikki; Paasonen, Jaakko; Sanchez, Clemente Cobos; Gröhn, Olli; Ilmoniemi, Risto J; Souza, Victor H. 2024. Physics in medicine and biology. 69: A1 Journal article (refereed), original research

Resting-state functional MRI of the nose as a novel investigational window into the nervous system

Ponticorvo, Sara; Paasonen, Jaakko; Stenroos, Petteri; Salo, Raimo A.; Tanila, Heikki; Filip, Pavel; Rothman, Douglas L.; Eberly, Lynn E.; Garwood, Michael; Metzger, Gregory J.; Gröhn, Olli; Michaeli, Shalom; Mangia, Silvia. 2024. Scientific reports. 14: . 26352 A1 Journal article (refereed), original research

A consensus protocol for functional connectivity analysis in the rat brain

Grandjean, Joanes; Desrosiers-Gregoire, Gabriel; Anckaerts, Cynthia; Angeles-Valdez, Diego; Ayad, Fadi; Barrière, David A.; Blockx, Ines; Bortel, Aleksandra; Broadwater, Margaret; Cardoso, Beatriz M.; Célestine, Marina; Chavez-Negrete, Jorge E.; Choi, Sangcheon; Christiaen, Emma; Clavijo, Perrin; Colon-Perez, Luis; Cramer, Samuel; Daniele, Tolomeo; Dempsey, Elaine; Diao, Yujian; Doelemeyer, Arno; Dopfel, David; Dvořáková, Lenka; Falfán-Melgoza, Claudia; Fernandes, Francisca F.; Fowler, Caitlin F. 2023. Nature neuroscience. 26: 673-681 A1 Journal article (refereed), original research

Event‐recurring multiband SWIFT functional MRI with 200‐ms temporal resolution during deep brain stimulation and isoflurane‐induced burst suppression in rat

Paasonen, Ekaterina; Paasonen, Jaakko; Lehto, Lauri J; Pirttimäki, Tiina; Laakso, Hanne; Wu, Lin; Ma, Jun; Idiyatullin, Djaudat; Tanila, Heikki; Mangia, Silvia; Michaeli, Shalom; Gröhn, Olli. 2022. Magnetic resonance in medicine. 87: 2872-2884 A1 Journal article (refereed), original research

Spatial signatures of anesthesia-induced burst-suppression differ between primates and rodents

Sirmpilatze, Nikoloz; Mylius, Judith; Ortiz-Rios, Michael; Baudewig, Jürgen; Paasonen, Jaakko; Golkowski, Daniel; Ranft, Andreas; Ilg, Rüdiger; Gröhn, Olli; Boretius, Susann. 2022. eLife. 11: . e74813 A1 Journal article (refereed), original research

Whole-brain studies of spontaneous behavior in head-fixed rats enabled by zero echo time MB-SWIFT fMRI

Paasonen, Jaakko; Stenroos, Petteri; Laakso, Hanne; Pirttimäki, Tiina; Paasonen, Ekaterina; Salo, Raimo A.; Tanila, Heikki; Idiyatullin, Djaudat; Garwood, Michael; Michaeli, Shalom; Mangia, Silvia; Gröhn, Olli. 2022. Neuroimage. 250: A1 Journal article (refereed), original research

Infantile status epilepticus disrupts myelin development

Bencurova, Petra; Laakso, Hanne; Salo, Raimo A; Paasonen, Ekaterina; Manninen, Eppu; Paasonen, Jaakko; Michaeli, Shalom; Mangia, Silvia; Bares, Martin; Brazdil, Milan; Kubova, Hana; Gröhn, Olli. 2021. Neurobiology of disease. 2022; 162: 105566 A1 Journal article (refereed), original research

Isoflurane affects brain functional connectivity in rats 1 month after exposure

Stenroos, Petteri; Pirttimäki, Tiina; Paasonen, Jaakko; Paasonen, Ekaterina; Salo, Raimo A; Koivisto, Hennariikka; Natunen, Teemu; Mäkinen, Petra; Kuulasmaa, Teemu; Hiltunen, Mikko; Tanila, Heikki; Gröhn, Olli. 2021. Neuroimage. 234: 117987 A1 Journal article (refereed), original research

Light sedation with short habituation time for large-scale functional magnetic resonance imaging studies in rats

Dvoráková, Lenka; Stenroos, Petteri; Paasonen, Ekaterina; Salo, Raimo A.; Paasonen, Jaakko; Gröhn, Olli. 2021. Nmr in biomedicine. 2022; 35: A1 Journal article (refereed), original research

Metabolism of hyperpolarised [1-13C]pyruvate in awake and anaesthetised rat brains

Hyppönen, Viivi; Stenroos, Petteri; Nivajärvi, Riikka; Ardenkjaer-Larsen, Jan Henrik; Gröhn, Olli; Paasonen, Jaakko; Kettunen, Mikko I. 2021. Nmr in biomedicine. 2022; 35: e4635 A1 Journal article (refereed), original research

Spinal cord fMRI with MB-SWIFT for assessing epidural spinal cord stimulation in rats

Laakso, Hanne; Lehto, Lauri J; Paasonen, Jaakko; Salo, Raimo; Canna, Antonietta; Lavrov, Igor; Michaeli, Shalom; Gröhn, Olli; Mangia, Silvia. 2021. Magnetic resonance in medicine. 86: 2137-2145 A1 Journal article (refereed), original research

Multi-band SWIFT enables quiet and artefact-free EEG-fMRI and awake fMRI studies in rat

Paasonen, J; Laakso, H; Pirttimäki, T; Stenroos, P; Salo, RA; Zhurakovskaya, E; Lehto, LJ; Tanila, H; Garwood, M; Michaeli, S; Idiyatullin, D; Mangia, S; Gröhn, O. 2020. Neuroimage. 206: 116338 A1 Journal article (refereed), original research

Sleep-State Dependent Alterations in Brain Functional Connectivity under Urethane Anesthesia in a Rat Model of Early-Stage Parkinson's Disease

Zhurakovskaya, Ekaterina; Leikas, Juuso; Pirttimäki, Tiina; Casas Mon, Francesc; Gynther, Mikko; Aliev, Rubin; Rantamäki, Tomi; Tanila, Heikki; Forsberg, Markus M; Gröhn, Olli; Paasonen, Jaakko; Jalkanen, Aaro J. 2019. eNeuro. 6: 1-12 A1 Journal article (refereed), original research

Awake Rat Brain Functional Magnetic Resonance Imaging Using Standard Radio Frequency Coils and a 3D Printed Restraint Kit

Stenroos, Petteri; Paasonen, Jaakko; Salo, Raimo A; Jokivarsi, Kimmo; Shatillo, Artem; Tanila, Heikki; Gröhn, Olli. 2018. Frontiers in neuroscience. 12: 548 A1 Journal article (refereed), original research

Functional connectivity under six anesthesia protocols and the awake condition in rat brain

Paasonen, Jaakko; Stenroos, Petteri; Salo, Raimo A; Kiviniemi, Vesa; Gröhn Olli. 2018. Neuroimage. 172: 9-20 A1 Journal article (refereed), original research

Dose-response effect of acute phencyclidine on functional connectivity and dopamine levels, and their association with schizophrenia-like symptom classes in rat

Paasonen J, Salo RA, Ihalainen J, Leikas JV, Savolainen K, Lehtonen M, Forsberg MM, Gröhn O. 2017. Neuropharmacology. 119: 15-25 A1 Journal article (refereed), original research

Optimization and implementation of preclinical pharmacologic fMRI for drug research and development

Paasonen Jaakko. 2017. Publications of the University of Eastern Finland. Dissertations in Health Sciences G5 Doctoral dissertation (article)

Comparison of seven different anesthesia protocols for nicotine pharmacologic magnetic resonance imaging in rat

Paasonen Jaakko, Salo Raimo A, Shatillo Artem, Forsberg Markus M, Närväinen Johanna, Huttunen Joanna K, Gröhn Olli. 2016. European neuropsychopharmacology. 26: 518-531 A1 Journal article (refereed), original research

Global Functional Connectivity Differences between Sleep-Like States in Urethane Anesthetized Rats Measured by fMRI

Zhurakovskaya Ekaterina, Paasonen Jaakko, Shatillo Artem, Lipponen Arto, Salo Raimo, Aliev Raimo, Tanila Heikki, Gröhn Olli. 2016. PLoS ONE. 11: e0155343 A1 Journal article (refereed), original research

Implantable RF-coil with multiple electrodes for long-term EEG-fMRI monitoring in rodents

Pirttimäki T, Salo RA, Shatillo A, Kettunen MI, Paasonen J, Sierra A, Jokivarsi K, Leinonen V, Andrade P, Quittek S, Pitkänen A, Gröhn O. 2016. Journal of neuroscience methods. 274: 154-163 A1 Journal article (refereed), original research

Resting-state functional MRI as a tool for evaluating brain hemodynamic responsiveness to external stimuli in rats

Paasonen Jaakko, Salo Raimo A, Huttunen Joanna K, Gröhn Olli. 2016. Magnetic resonance in medicine. 78: 1136-1146 A1 Journal article (refereed), original research

In vivo magnetic resonance imaging and spectroscopy identifies oncolytic adenovirus responders

Hemminki O, Immonen R, Närväinen J, Kipar A, Paasonen J, Jokivarsi KT, Yli-Ollila H, Soininen P, Partanen K, Joensuu T, Parvianen S, Pesonen SK, Koski A, Vähä-Koskela M, Cerullo V, Pesonen S, Gröhn OH, Hemminki A. 2013. International journal of cancer. 6 DEC 2013: -- A1 Journal article (refereed), original research

The Seventh Annual Post-Graduate Symposium of the doctoral program in molecular medicine Winter School 2013. Abstracts

Belt H, Huusko N, Kaminska D, Munoz Ruiz M, Paasonen J, Pellinen R. 2013. Publications of the University of Eastern Finland. Reports and studies in health sciences. . Itä-Suomen yliopisto C2 Edited book, conference proceedings or special issue of a journal

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Publications

Modeling the stress and forces on multi-channel TMS coil arrays in high-field MRI scanners

Resting-state functional MRI of the nose as a novel investigational window into the nervous system

A consensus protocol for functional connectivity analysis in the rat brain

Event‐recurring multiband SWIFT functional MRI with 200‐ms temporal resolution during deep brain stimulation and isoflurane‐induced burst suppression in rat

Spatial signatures of anesthesia-induced burst-suppression differ between primates and rodents

Whole-brain studies of spontaneous behavior in head-fixed rats enabled by zero echo time MB-SWIFT fMRI

Infantile status epilepticus disrupts myelin development

Isoflurane affects brain functional connectivity in rats 1 month after exposure

Light sedation with short habituation time for large-scale functional magnetic resonance imaging studies in rats

Metabolism of hyperpolarised [1-13C]pyruvate in awake and anaesthetised rat brains

Spinal cord fMRI with MB-SWIFT for assessing epidural spinal cord stimulation in rats

Multi-band SWIFT enables quiet and artefact-free EEG-fMRI and awake fMRI studies in rat

Sleep-State Dependent Alterations in Brain Functional Connectivity under Urethane Anesthesia in a Rat Model of Early-Stage Parkinson's Disease

Awake Rat Brain Functional Magnetic Resonance Imaging Using Standard Radio Frequency Coils and a 3D Printed Restraint Kit

Functional connectivity under six anesthesia protocols and the awake condition in rat brain

Dose-response effect of acute phencyclidine on functional connectivity and dopamine levels, and their association with schizophrenia-like symptom classes in rat

Optimization and implementation of preclinical pharmacologic fMRI for drug research and development

Comparison of seven different anesthesia protocols for nicotine pharmacologic magnetic resonance imaging in rat

Global Functional Connectivity Differences between Sleep-Like States in Urethane Anesthetized Rats Measured by fMRI

Implantable RF-coil with multiple electrodes for long-term EEG-fMRI monitoring in rodents

Resting-state functional MRI as a tool for evaluating brain hemodynamic responsiveness to external stimuli in rats

In vivo magnetic resonance imaging and spectroscopy identifies oncolytic adenovirus responders

The Seventh Annual Post-Graduate Symposium of the doctoral program in molecular medicine Winter School 2013. Abstracts