
Suvi Linna-Kuosmanen
Senior Researcher
PI and group leader of Linna Lab.
A.I. Virtanen Institute for Molecular Sciences, Faculty of Health Sciences
[email protected] | +358 50 347 3592
Suvi Linna-Kuosmanen is a senior scientist at the A.I. Virtanen Institute and a principal investigator and leader of Linna Lab. The lab was established in October 2023 and is currently located at the University of Eastern Finland.
Linna-Kuosmanen uses single-cell and spatial omics, data integration, and machine learning / AI models to identify novel drug targets and biomarkers for clinical applications and more personalized medicine. Her ongoing work combines unique human patient samples and engineered human tissue models with state-of-the-art experimental and computational methods, to elucidate disease mechanisms of major aging-related chronic diseases, as well as aging itself, with special emphasis on coronary artery disease, heart failure, and atrial fibrillation. In addition to mapping molecular changes in clinical samples, she investigates the effects of environmental exposures, such as micro- and nanoplastics, in the cardiac cell and tissue environments to estimate their impact on disease manifestation and progression.
Prior to her current position, Linna-Kuosmanen trained as a postdoctoral researcher mapping cardiovascular disease-associated changes in the cells of ex vivo human heart samples, and establishing high-resolution maps of microvasculature in these clinical samples at the Computer Science and Artificial Intelligence Lab (CSAIL) of Massachusetts Institute of Technology (MIT) and the Broad Institute of MIT and Harvard, Cambridge, USA. She received her PhD in molecular medicine at the University of Eastern Finland, Kuopio, Finland, where she examined the disease mechanisms and putative biomarkers of atherosclerosis through cardiovascular genomics. Linna-Kuosmanen holds a masters in biochemistry from the University of Kuopio, Finland, and studied neuroscience in honours program at the University of Glasgow during her bachelors stage.
Research groups
Publications
23/23 items-
Protocol for achieving enhanced snRNA-seq data quality using Quality Clustering
Tavi, Paavo J; Ojanen, Johannes; Laitinen, Pia; Linna-Kuosmanen, Suvi. 2025. STAR protocols. 6: A1 Journal article (refereed), original research -
Serum RNA Profile Reflects Fluid Status and Atrophic Retinal Changes in Neovascular Age-Related Macular Degeneration
Helotera, Hanna; Kostanek, Joanna; Liukkonen, Mikko; Siintamo, Leea; Linna-Kuosmanen, Suvi; Watala, Cezary; Blasiak, Janusz; Kaarniranta, Kai. 2025. International journal of molecular sciences. 26: A1 Journal article (refereed), original research -
Genetics, transcriptomics, metagenomics, and metabolomics in the pathogenesis and prediction of atrial fibrillation
Linna-Kuosmanen, Suvi; Vuori, Matti; Kiviniemi, Tuomas; Palmu, Joonatan; Niiranen, Teemu. 2024. European heart journal supplements. 26: iv33-iv40 A1 Journal article (refereed), original research -
Integrative multi-omics profiling in human decedents receiving pig heart xenografts
Schmauch, Eloi; Piening, Brian; Mohebnasab, Maedeh; Xia, Bo; Zhu, Chenchen; Stern, Jeffrey; Zhang, Weimin; Dowdell, Alexa K; Kim, Jacqueline I; Andrijevic, David; Khalil, Karen; Jaffe, Ian S; Loza, Bao Li; Gragert, Loren; Camellato, Brendan R; Oliveira, Michelli F; O’Brien, Darragh P; Chen, Han M; Weldon, Elaina; Gao, Hui; Gandla, Divya; Chang, Andrew; Bhatt, Riyana; Gao, Sarah; Lin, Xiangping; Reddy, Kriyana P; Kagermazova, Larisa; Habara, Alawi H; Widawsky, Sophie; Liang, Feng Xia; Sall, Josep. 2024. Nature medicine. 30: 1448-1460 A1 Journal article (refereed), original research -
QClus: a droplet filtering algorithm for enhanced snRNA-seq data quality in challenging samples
Schmauch, Eloi; Ojanen, Johannes; Galani, Kyriakitsa; Jalkanen, Juho; Harju, Kristiina; Hollmen, Maija; Kokki, Hannu; Gunn, Jarmo; Halonen, Jari; Hartikainen, Juha; Kiviniemi, Tuomas; Tavi, Pasi; Kaikkonen, Minna U.; Kellis, Manolis; Linna-Kuosmanen, Suvi. 2024. Nucleic acids research. 2025; 53: A1 Journal article (refereed), original research -
Targeting IL-1 controls refractory pityriasis rubra pilaris
Schmauch, Eloi; Severin, Yannik; Xing, Xianying; Mangold, Aaron; Conrad, Curdin; Johannsen, Pål; Kahlenberg, J Michelle; Mellett, Mark; Navarini, Alexander; Nobbe, Stefan; Sarkar, Mrinal K; Satyam, Abhigyan; Tsoi, Lam C; French, Lars E; Nilsson, Jakob; Linna-Kuosmanen, Suvi; Kaikkonen, Minna U; Snijder, Berend; Kellis, Manolis; Gudjonsson, Johann E.; Tsokos, George C; Contassot, Emmanuel; Kolios, Antonios GA. 2024. Science advances. 10: . eado2365 A1 Journal article (refereed), original research -
The impact of multi-omics in medicine
Wang, Linghua; Qu, Jing; Harari, Oscar; Boddey, Justin A; Wang, Zhang; Linna-Kuosmanen, Suvi. 2024. Cell reports medicine. 5: B1 Non-refereed journal articles -
Transcriptomic and spatial dissection of human ex vivo right atrial tissue reveals proinflammatory microvascular changes in ischemic heart disease
Linna-Kuosmanen, Suvi; Schmauch, Eloi; Galani, Kyriakitsa; Ojanen, Johannes; Boix, Carles A; Örd, Tiit; Toropainen, Anu; Singha, Prosanta K; Moreau, Pierre R; Harju, Kristiina; Blazeski, Adriana; Segerstolpe, Åsa; Lahtinen, Veikko; Hou, Lei; Kang, Kai; Meibalan, Elamaran; Agudelo, Leandro Z; Kokki, Hannu; Halonen, Jari; Jalkanen, Juho; Gunn, Jarmo; MacRae, Calum A; Hollmén, Maija; Hartikainen, Juha EK; Kaikkonen, Minna U; García-Cardeña, Guillermo; Tavi, Pasi; Kiviniemi, Tuomas; Kellis, Manolis. 2024. Cell reports medicine. 5: . 101556 A1 Journal article (refereed), original research -
Genomic approaches to identify and investigate genes associated with atrial fibrillation and heart failure susceptibility
Patel, Kush Ketan; Venkatesan, Cynthia; Abdelhalim, Habiba; Zeeshan, Saman; Arima, Yuichiro; Linna-Kuosmanen, Suvi; Ahmed, Zeeshan. 2023. Human genomics. 17: . 47 A2 Review article, Literature review, Systematic review -
NRF2 is a key regulator of endothelial microRNA expression under proatherogenic stimuli
Linna-Kuosmanen, Suvi; Bosch, Vanesa Tomas; Moreau, Pierre R; Bouvy-Liivrand, Maria; Niskanen, Henri; Kansanen, Emilia; Kivelä, Annukka; Hartikainen, Juha; Hippeläinen, Mikko; Kokki, Hannu; Tavi, Pasi; Levonen, Anna-Liisa; Kaikkonen, Minna U. 2021. Cardiovascular research. 117: 1339-1357 A1 Journal article (refereed), original research