Minna Kaikkonen-Määttä
Laitoksen johtaja
Professori
A.I. Virtanen -instituutti, Terveystieteiden tiedekunta
minna.kaikkonen@uef.fi | 040 355 2413
Tutkimusryhmämme selvittää sepelvaltimotaudin ja valtimonkovettumataudin molekulaarisia mekanismeja hyödyntämällä laajasti viimeisimpiä genomiikan menetelmiä.
Tutkimusryhmät
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Itä-Suomen Genomikeskus 02.03.2009 -
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Kardiovaskulaarinen Genomiikka (Kaikkonen tutkimu… 01.09.2015 -
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Yksisolu-genomiikan keskus 01.01.2020 -
Projektit
Julkaisut
110/110 kappaletta-
Coronary Artery Disease Risk Variant Dampens the Expression of CALCRL by Reducing HSF Binding to Shear Stress Responsive Enhancer in Endothelial Cells in Vitro
Selvarajan, Ilakya; Kiema, Miika; Huang, Ru Ting; Li, Jin; Zhu, Jiayu; Pölönen, Petri; Örd, Tiit; Õunap, Kadri; Godiwala, Mehvash; Golebiewski, Anna Kathryn; Ravindran, Aarthi; Mäklin, Kiira; Toropainen, Anu; Stolze, Lindsey K; Arce, Maximiliano; Magnusson, Peetra U; White, Stephen; Romanoski, Casey E; Heinäniemi, Merja; Laakkonen, Johanna P; Fang, Yun; Kaikkonen, Minna U. 2024. Arteriosclerosis, thrombosis, and vascular biology. 44: 1330-1345 -
Enhancing prediction accuracy of coronary artery disease through machine learning-driven genomic variant selection
Alireza, Z.; Maleeha, M.; Kaikkonen, M.; Fortino, V.. 2024. Journal of translational medicine. 22: . 356 -
Genetic variation drives differences in obesity-related gene regulation
Kaikkonen, Minna U. 2024. Trends in genetics. 40: 296-298 -
Integrative multi-omics profiling in human decedents receiving pig heart xenografts
Schmauch, Eloi; Piening, Brian; Mohebnasab, Maedeh; Xia, Bo; Zhu, Chenchen; Stern, Jeffrey; Zhang, Weimin; Dowdell, Alexa K.; Kim, Jacqueline I.; Andrijevic, David; Khalil, Karen; Jaffe, Ian S.; Loza, Bao Li; Gragert, Loren; Camellato, Brendan R.; Oliveira, Michelli F.; O’Brien, Darragh P.; Chen, Han M.; Weldon, Elaina; Gao, Hui; Gandla, Divya; Chang, Andrew; Bhatt, Riyana; Gao, Sarah; Lin, Xiangping; Reddy, Kriyana P.; Kagermazova, Larisa; Habara, Alawi H.; Widawsky, Sophie; Liang, Feng Xia; Sa. 2024. Nature medicine. 30: 1448-1460 -
Mechanosensitive super-enhancers regulate genes linked to atherosclerosis in endothelial cells
Li, Jin; Zhu, Jiayu; Gray, Olivia; Sobreira, Debora R; Wu, David; Huang, Ru-Ting; Miao, Bernadette; Sakabe, Noboru J; Krause, Matthew D; Kaikkonen, Minna U; Romanoski, Casey E; Nobrega, Marcelo A; Fang, Yun. 2024. Journal of cell biology. 223: -
Oncogenic KEAP1 mutations activate TRAF2-NFκB signaling to prevent apoptosis in lung cancer cells
Deen, Ashik Jawahar; Adinolfi, Simone; Härkönen, Jouni; Patinen, Tommi; Liu, Xiaonan; Laitinen, Tuomo; Takabe, Piia; Kainulainen, Kirsi; Pasonen-Seppänen, Sanna; Gawriyski, Lisa M; Arasu, Uma Thanigai; Selvarajan, Ilakya; Mäkinen, Petri; Laitinen, Hanna; Kansanen, Emilia; Kaikkonen, Minna U; Poso, Antti; Varjosalo, Markku; Levonen, Anna-Liisa. 2024. Redox biology. 69: -
Progression of herpesvirus infection remodels mitochondrial organization and metabolism
Leclerc, Simon; Gupta, Alka; Ruokolainen, Visa; Chen, Jian Hua; Kunnas, Kari; Ekman, Axel A; Niskanen, Henri; Belevich, Ilya; Vihinen, Helena; Turkki, Paula; Perez-Berna, Ana J; Kapishnikov, Sergey; Mäntylä, Elina; Harkiolaki, Maria; Dufour, Eric; Hytönen, Vesa; Pereiro, Eva; McEnroe, Tony; Fahy, Kenneth; Kaikkonen, Minna U; Jokitalo, Eija; Larabell, Carolyn A; Weinhardt, Venera; Mattola, Salla; Aho, Vesa; Vihinen-Ranta, Maija. 2024. PLoS pathogens. 20: -
Secreted Protein Profiling of Human Aortic Smooth Muscle Cells Identifies Vascular Disease Associations
Aherrahrou, Rédouane; Baig, Ferheen; Theofilatos, Konstantinos; Lue, Dillon; Beele, Alicia; Örd, Tiit; Kaikkonen, Minna U; Aherrahrou, Zouhair; Cheng, Qi; Ghosh, Saikat Kumar B; Karnewar, Santosh; Karnewar, Vaishnavi; Finn, Aloke V; Owens, Gary K; Joner, Michael; Mayr, Manuel; Civelek, Mete. 2024. Arteriosclerosis, thrombosis, and vascular biology. 44: 898-914 -
Single-Cell Gene-Regulatory Networks of Advanced Symptomatic Atherosclerosis
Mocci, Giuseppe; Sukhavasi, Katyayani; Örd, Tiit; Bankier, Sean; Singha, Prosanta; Arasu, Uma Thanigai; Agbabiaje, Olayinka Oluwasegun; Mäkinen, Petri; Ma, Lijiang; Hodonsky, Chani J; Aherrahrou, Redouane; Muhl, Lars; Liu, Jianping; Gustafsson, Sonja; Byandelger, Byambajav; Wang, Ying; Koplev, Simon; Lendahl, Urban; Owens, Gary; Leeper, Nicholas J; Pasterkamp, Gerard; Vanlandewijck, Michael; Michoel, Tom; Ruusalepp, Arno; Hao, Ke; Ylä-Herttuala, Seppo; Väli, Marika; Järve, Heli; Mokry, Michal; C. 2024. Circulation research. [Epub ahead of print 19 April 2024]: 1-19 -
Technological advancements in functional interpretation of genome-wide association studies (GWAS) findings: bridging the gap to clinical translation
Aherrahrou, Redouane; Kaikkonen, Minna U. 2024. Febs letters. [Epub ahead of print 29 April 2024]: 1-2