Anssi Lipponen - UEFConnect

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Information Publications

Research groups

Epilepsy Research

Keywords

bioinformatics gene expression molecular biology molecular medicine

Publications

19/19 items

Detection of SARS-COV-2 variants and their proportions in wastewater samples using next-generation sequencing in Finland
Lipponen, Anssi; Kolehmainen, Aleksi; Oikarinen, Sami; Hokajärvi, Anna-Maria; Lehto, Kirsi-Maarit; Heikinheimo, Annamari; Halkilahti, Jani; Juutinen, Aapo; Luomala, Oskari; Smura, Teemu; Liitsola, Kirsi; Blomqvist, Soile; Savolainen-Kopra, Carita; Pitkänen, Tarja; Länsivaara, Annika; Hyder, Rafiqul; Janhonen, Erja; Heikinheimo, Annamari; Heljanko, Viivi; Johansson, Venla; Kurittu, Paula; Tiwari, Ananda; Al-Mustapha, Ahmad; Sarekoski, Anniina; Möttönen, Teemu; Räisänen, Kati; Savolainen-Kopra, Ca. 2024. Scientific reports. 14: . 7751 A1 Journal article (refereed), original research
Risk Variants Associated With Normal Pressure Hydrocephalus
Räsänen, Joel; Heikkinen, Sami; Mäklin, Kiira; Lipponen, Anssi; Kuulasmaa, Teemu; Mehtonen, Juha; Korhonen, Ville E; Junkkari, Antti; Grenier-Boley, Benjamin; Bellenguez, Celine; Oinas, Minna; Avellan, Cecilia; Frantzén, Janek; Kotkansalo, Anna; Rinne, Jaakko; Ronkainen, Antti; Kauppinen, Mikko; von und zu Fraunberg, Mikael; Lönnrot, Kimmo; Satopää, Jarno; Perola, Markus; Koivisto, Anne M; Julkunen, Valtteri; Portaankorva, Anne M; Mannermaa, Arto; Soininen, Hilkka; Helisalmi, Seppo; Jääskeläinen. 2024. Neurology. 103: 1-13 A1 Journal article (refereed), original research
The effects of RT-qPCR standards on reproducibility and comparability in monitoring SARS-CoV-2 levels in wastewater
Juutinen, Aapo; Tiwari, Ananda; Hokajärvi, Anna-Maria; Luomala, Oskari; Kolehmainen, Aleksi; Nurmi, Eveliina; Salmivirta, Elisa; Pitkänen, Tarja; Lipponen, Anssi. 2024. Scientific reports. 14: . 25582 A1 Journal article (refereed), original research
Gene Expression Profile as a Predictor of Seizure Liability
Lipponen, Anssi; Kajevu, Natallie; Natunen, Teemu; Ciszek, Robert; Puhakka, Noora; Hiltunen, Mikko; Pitkänen, Asla. 2023. International journal of molecular sciences. 24: A1 Journal article (refereed), original research
Treatment of Status Epilepticus after Traumatic Brain Injury Using an Antiseizure Drug Combined with a Tissue Recovery Enhancer Revealed by Systems Biology
Kajevu, Natallie; Lipponen, Anssi; Andrade, Pedro; Bañuelos, Ivette; Puhakka, Noora; Hämäläinen, Elina; Natunen, Teemu; Hiltunen, Mikko; Pitkänen, Asla. 2023. International journal of molecular sciences. 24: . 14049 A1 Journal article (refereed), original research
Regulation of parvalbumin interactome in the perilesional cortex after experimental traumatic brain injury
Hiltunen, Johanna; Ndode-Ekane, Xavier Ekolle; Lipponen, Anssi; Drexel, Meinrad; Sperk, Günther; Puhakka, Noora; Pitkänen, Asla. 2021. Neuroscience. 475: 52-72 A1 Journal article (refereed), original research
A systems biology approach for identification and stepwise validation of pharmacotherapy candidates for traumatic brain injury
Lipponen, Anssi. 2020. Publications of the University of Eastern Finland. Dissertations in Health Sciences G5 Doctoral dissertation (article)
Plau/Plaur double-deficiency did not worsen lesion severity or vascular integrity after traumatic brain injury
Kyyriäinen, Jenni; Tapiala, Jesse; Lipponen, Anssi; Ekolle Ndode-Ekane, Xavier; Pitkänen, Asla. 2020. Neuroscience letters. 729: 134935 A1 Journal article (refereed), original research
Deficiency of urokinase-type plasminogen activator and its receptor affects social behavior and increases seizure susceptibility
Kyyriäinen, J; Bolkvadze, T; Koivisto, H; Lipponen, A; Pérez, LO; Ekolle Ndode-Ekane, X; Tanila, H; Pitkänen, A. 2019. Epilepsy research. 151: 67-74 A1 Journal article (refereed), original research
Dynamics of clusterin protein expression in the brain and plasma following experimental traumatic brain injury
Das Gupta, S; Lipponen, A; Paldanius, KMA; Puhakka, N; Pitkänen, A. 2019. Scientific reports. 9: 20208 A1 Journal article (refereed), original research
Extracellular Vesicles as Diagnostics and Therapeutics for Structural Epilepsies
Karttunen, J; Heiskanen, M; Lipponen, A; Poulsen, D; Pitkänen, A. 2019. International journal of molecular sciences. 20: 1259 A2 Review article, Literature review, Systematic review
In Vitro and In Vivo Pipeline for Validation of Disease-Modifying Effects of Systems Biology-Derived Network Treatments for Traumatic Brain Injury - Lessons Learned
Lipponen, A; Natunen, T; Hujo, M; Ciszek, R; Hämäläinen, E; Tohka, J; Hiltunen, M; Paananen, J; Poulsen, D; Kansanen, E; Ekolle Ndode-Ekane, X; Levonen, AL; Pitkänen, A. 2019. International journal of molecular sciences. 20: 5395 A1 Journal article (refereed), original research
Age- and quality-dependent DNA methylation correlate with melanin-based coloration in a wild bird
Soulsbury, Carl D; Lipponen, Anssi; Wood, Kristie; Mein, Charles A; Hoffman, Joseph I; Lebigre, Christophe. 2018. Ecology and evolution. 8: 6547-6557 A1 Journal article (refereed), original research
Effect of resource availability on evolution of virulence and competition in an environmentally transmitted pathogen
Pulkkinen, Katja; Pekkala, Nina; Ashrafi, Roghaieh; Hämäläinen, Dorrit M; Nkembeng, Aloysius N; Lipponen, Anssi; Hiltunen, Teppo; Valkonen, Janne K; Taskinen, Jouni. 2018. Fems microbiology ecology. 94: fiy060 A1 Journal article (refereed), original research
Precipitation-based extracellular vesicle isolation from rat plasma co-precipitate vesicle-free microRNAs
Karttunen, Jenni; Heiskanen, Mette; Navarro-Ferrandis, Vicente; Das Gupta, Shalini; Lipponen, Anssi; Puhakka, Noora; Rilla, Kirsi; Koistinen, Arto; Pitkänen, Asla. 2018. Journal of extracellular vesicles. 2019; 8: 1555410 A1 Journal article (refereed), original research
Transcription factors Tp73, Cebpd, Pax6, and Spi1 rather than DNA methylation regulate chronic transcriptomics changes after experimental traumatic brain injury
Lipponen, Anssi; El-Osta, Assam; Kaspi, Antony; Ziemann, Mark; Khurana, Ishant; Harikrishnan, K N; Navarro-Ferrandis, Vicente; Puhakka, Noora; Paananen, Jussi; Pitkänen, Asla. 2018. Acta neuropathologica communications. 6: 17 A1 Journal article (refereed), original research
Analysis of Post-Traumatic Brain Injury Gene Expression Signature Reveals Tubulins, Nfe2l2, Nfkb, Cd44, and S100a4 as Treatment Targets
Lipponen Anssi, Paananen Jussi, Puhakka Noora, Pitkänen Asla. 2016. Scientific reports. 6: 31570 A1 Journal article (refereed), original research
High Nutrient Concentration Can Induce Virulence Factor Expression and Cause Higher Virulence in an Environmentally Transmitted Pathogen
Penttinen Reetta, Kinnula Hanna, Lipponen Anssi, Bamford Jaana KH, Sundberg Lotta-Riina. 2016. Microbial ecology. 72: 955-964 A1 Journal article (refereed), original research
Gender issues in antiepileptogenic treatments
Pitkänen A, Huusko N, Ndode-Ekane XE, Kyyriäinen J, Lipponen A, Lipsanen A, Sierra A, Bolkvadze T. 2014. Neurobiology of disease. 2014 Jun 6 ePub ahead of print: pii: S0969-9961(14)00163-6 A1 Journal article (refereed), original research