
Linna Lab
Leaders
Recent studies have shown that human tissues contain plastic. Especially concerning are the findings that suggest a correlation between an increased environmental load and tissue accumulation, as plastics may accumulate more to sick tissue compared to healthy and lead to increased patient mortality. In my research group, we investigate plastics in the human cardiac tissue and estimate the effects of plastic exposure in the cardiac cell and tissue environment in regards to the development/progression of cardiovascular disease. We suggest a “sand in a sock” paradigm, where in the healthy state the plastics are mostly tolerated via slight adaptations of the system to their presence. Upon injury, the tissue environment changes drastically, triggering detrimental effects on the weakened system, allowing additional plastic entry, and further damage. In addition to disease mechanisms, the information gathered in our studies may contribute to new environmental policies that could have an immediate impact on the lives of millions of people.
Our research is supported by University of Eastern Finland, Reseach Council of Finland, Sigrid Jusélius Foundation, Yrjö Jahnsson Foundation, Paavo Nurmi Foundation, and Aarne Koskelo Foundation.
Keywords
Publications
24 items-
Protocol for achieving enhanced snRNA-seq data quality using Quality Clustering
Tavi, Paavo J; Ojanen, Johannes; Laitinen, Pia; Linna-Kuosmanen, Suvi. 2025. STAR protocols. 6: A1 Journal article (refereed), original research -
Serum RNA Profile Reflects Fluid Status and Atrophic Retinal Changes in Neovascular Age-Related Macular Degeneration
Helotera, Hanna; Kostanek, Joanna; Liukkonen, Mikko; Siintamo, Leea; Linna-Kuosmanen, Suvi; Watala, Cezary; Blasiak, Janusz; Kaarniranta, Kai. 2025. International journal of molecular sciences. 26: A1 Journal article (refereed), original research -
Genetics, transcriptomics, metagenomics, and metabolomics in the pathogenesis and prediction of atrial fibrillation
Linna-Kuosmanen, Suvi; Vuori, Matti; Kiviniemi, Tuomas; Palmu, Joonatan; Niiranen, Teemu. 2024. European heart journal supplements. 26: iv33-iv40 A1 Journal article (refereed), original research -
Integrative multi-omics profiling in human decedents receiving pig heart xenografts
Schmauch, Eloi; Piening, Brian; Mohebnasab, Maedeh; Xia, Bo; Zhu, Chenchen; Stern, Jeffrey; Zhang, Weimin; Dowdell, Alexa K; Kim, Jacqueline I; Andrijevic, David; Khalil, Karen; Jaffe, Ian S; Loza, Bao Li; Gragert, Loren; Camellato, Brendan R; Oliveira, Michelli F; O’Brien, Darragh P; Chen, Han M; Weldon, Elaina; Gao, Hui; Gandla, Divya; Chang, Andrew; Bhatt, Riyana; Gao, Sarah; Lin, Xiangping; Reddy, Kriyana P; Kagermazova, Larisa; Habara, Alawi H; Widawsky, Sophie; Liang, Feng Xia; Sall, Josep. 2024. Nature medicine. 30: 1448-1460 A1 Journal article (refereed), original research -
QClus: a droplet filtering algorithm for enhanced snRNA-seq data quality in challenging samples
Schmauch, Eloi; Ojanen, Johannes; Galani, Kyriakitsa; Jalkanen, Juho; Harju, Kristiina; Hollmen, Maija; Kokki, Hannu; Gunn, Jarmo; Halonen, Jari; Hartikainen, Juha; Kiviniemi, Tuomas; Tavi, Pasi; Kaikkonen, Minna U.; Kellis, Manolis; Linna-Kuosmanen, Suvi. 2024. Nucleic acids research. 2025; 53: A1 Journal article (refereed), original research -
Targeting IL-1 controls refractory pityriasis rubra pilaris
Schmauch, Eloi; Severin, Yannik; Xing, Xianying; Mangold, Aaron; Conrad, Curdin; Johannsen, Pål; Kahlenberg, J Michelle; Mellett, Mark; Navarini, Alexander; Nobbe, Stefan; Sarkar, Mrinal K; Satyam, Abhigyan; Tsoi, Lam C; French, Lars E; Nilsson, Jakob; Linna-Kuosmanen, Suvi; Kaikkonen, Minna U; Snijder, Berend; Kellis, Manolis; Gudjonsson, Johann E.; Tsokos, George C; Contassot, Emmanuel; Kolios, Antonios GA. 2024. Science advances. 10: . eado2365 A1 Journal article (refereed), original research -
The impact of multi-omics in medicine
Wang, Linghua; Qu, Jing; Harari, Oscar; Boddey, Justin A; Wang, Zhang; Linna-Kuosmanen, Suvi. 2024. Cell reports medicine. 5: B1 Non-refereed journal articles -
Transcriptomic and spatial dissection of human ex vivo right atrial tissue reveals proinflammatory microvascular changes in ischemic heart disease
Linna-Kuosmanen, Suvi; Schmauch, Eloi; Galani, Kyriakitsa; Ojanen, Johannes; Boix, Carles A; Örd, Tiit; Toropainen, Anu; Singha, Prosanta K; Moreau, Pierre R; Harju, Kristiina; Blazeski, Adriana; Segerstolpe, Åsa; Lahtinen, Veikko; Hou, Lei; Kang, Kai; Meibalan, Elamaran; Agudelo, Leandro Z; Kokki, Hannu; Halonen, Jari; Jalkanen, Juho; Gunn, Jarmo; MacRae, Calum A; Hollmén, Maija; Hartikainen, Juha EK; Kaikkonen, Minna U; García-Cardeña, Guillermo; Tavi, Pasi; Kiviniemi, Tuomas; Kellis, Manolis. 2024. Cell reports medicine. 5: . 101556 A1 Journal article (refereed), original research -
Genomic approaches to identify and investigate genes associated with atrial fibrillation and heart failure susceptibility
Patel, Kush Ketan; Venkatesan, Cynthia; Abdelhalim, Habiba; Zeeshan, Saman; Arima, Yuichiro; Linna-Kuosmanen, Suvi; Ahmed, Zeeshan. 2023. Human genomics. 17: . 47 A2 Review article, Literature review, Systematic review -
Global MicroRNA Profiling of Vascular Endothelial Cells
Schmauch, Eloi; Levonen, Anna-Liisa; Linna-Kuosmanen, Suvi. Teoksessa: Fiedler, L.R.; Pellet-Many, C(toim.) , 2022. VEGF Signaling. s. 157-186. Humana press A3 Book section, Chapters in research books